Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr2g3347 ATGGGAGTTTGTTTGAGCGCTCAAGTTAAAACTGAACTTCCTTGTAACACTGGGTTAAATTCAAACAATAAGGTTTCCGCTGTATCAGTGCCTCCGACCGCTCAAAGTGAGGGTGAGATCTTGCCGTCATCCACTTTAAAGAGCTATACCTATGCAGAACTCTCGACAGCCACTGGAAATTTTTTTCCAGACAATGTGTTAGGAGAAGGTAGTTTTGGAGCAGTTTTTAAGGGTTGGATTGATGAGAATTCATTTTCTGCTGCCAAACCTGGCATTGGCATTGTTATTGCTATCAAAAGCCTTAATCAAGAAAGCTTCCGAAGTCACAGGGAGTGGTTGGCTGAAGTAAACTACCATGGAAGGTTTTCTCATCCTCATTTAGTGAGATTGATCGGTTATTGCCTTGAAAATGAACACCGTCTTCTCGTCTATGAGTTTATGCCTCGTGGAAGCTTGGAGAATCACTTGTTCAGGAGAGGATCATATTTCCAACCTCTTTCATGGAGCCTCCGTCTGAAGGTTGCTCTTGACGCTGCCAAAGGGCTTGCATTTCTGCACAGTGCTGAAAATAAAGTGATATATAGAGATTTTAAGACTTCAAATGTCTTGTTGGATTCTGATTATAATGCAAAGCTTTCTGATTTTGGGCTGGCAAGGGATGGTCCAACAGGTGACAAAAGTCACATCTTCACCAACACGTTAGTAGGAAATAATGGATATGCAGCTCCTGAATATGTAGATTCAGGTCTTCTTACTACGAAGAGTGATGTCTATAGTTTTGGAGTTGTCCTGCTTGAAATGGTATGTGGTAGGAGGGTAATTGACAATAATAAACCATATGGAGAACACAACTTGGTCCAATGGGCTAAACCGTATCTCACCGACAAACGCAAGGTTTTGAGGGTGTTAGACAGTCGGCTTGAAGGGCAGTGTTCATCGGTTGAAGCCTATAAGGTAACCTCCCTTTCTTTGAAATGCCTATCAGAAAAATCCTCCAGGCCTAACATGGATGAAGTTGTTAGCACTTTGGAGCAGCTGGTGCACAAACTTCAAACAAGGCAGAACTGA 1068 0.4242 MGVCLSAQVKTELPCNTGLNSNNKVSAVSVPPTAQSEGEILPSSTLKSYTYAELSTATGNFFPDNVLGEGSFGAVFKGWIDENSFSAAKPGIGIVIAIKSLNQESFRSHREWLAEVNYHGRFSHPHLVRLIGYCLENEHRLLVYEFMPRGSLENHLFRRGSYFQPLSWSLRLKVALDAAKGLAFLHSAENKVIYRDFKTSNVLLDSDYNAKLSDFGLARDGPTGDKSHIFTNTLVGNNGYAAPEYVDSGLLTTKSDVYSFGVVLLEMVCGRRVIDNNKPYGEHNLVQWAKPYLTDKRKVLRVLDSRLEGQCSSVEAYKVTSLSLKCLSEKSSRPNMDEVVSTLEQLVHKLQTRQN* 356
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr2g3347 355 Pfam Protein tyrosine and serine/threonine kinase 65 343 IPR001245 GO:0004672|GO:0006468
Mtr2g3347 355 ProSitePatterns Protein kinases ATP-binding region signature. 67 99 IPR017441 GO:0005524
Mtr2g3347 355 ProSitePatterns Serine/Threonine protein kinases active-site signature. 192 204 IPR008271 GO:0004672|GO:0006468
Mtr2g3347 355 Gene3D Phosphorylase Kinase; domain 1 37 146 - -
Mtr2g3347 355 ProSiteProfiles Protein kinase domain profile. 61 347 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr2g3347 355 SUPERFAMILY Protein kinase-like (PK-like) 40 348 IPR011009 -
Mtr2g3347 355 PANTHER OS01G0588500 PROTEIN-RELATED 15 349 - -
Mtr2g3347 355 Gene3D Transferase(Phosphotransferase) domain 1 147 355 - -
Mtr2g3347 355 PANTHER SERINE/THREONINE-PROTEIN KINASE PBL11-RELATED 15 349 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr2g3347 Mtr-Chr2 47560644 47567510 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr2g3347 39 343 Glycoside Hydrolase AT3G07070 44.300 2.42e-88 270
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Mtr2g3347 PK_Tyr_Ser-Thr 2e-43 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr2g3347 - - gmx:100788856 515.768
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr2g3347 2 47560644 47567510 Mtr2g3347 2 47560644 47567510 ECH
Mtr2g3347 2 47560644 47567510 Mtr4g1876 4 31961428 31964230 PCT