Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr2g3340 ATGAAACTTTTGAACCCAAACCCATTTCCCTTTTCTTCTCAATCTCAGACCCAACATATGGAACAACAATCTTCACCTACAAACCTTAAAGTTCATATTGCTGTTGGTAAATCACTTCACAAAACCACCACTTTGCTTCAATGGACTTTTAACCACTTTCAAAACGCTGAAATTGTATTAATTCATGTTTATCAACCTTCTCCTTTTATACCCACTTTGTTGGGGAAAATGCCAGCATCCCAGGCTAATCCTGAAGTGGTATCTGCTTTTAGAAGAGAGGAAAGAGAACAGACTATGAGGTTTACTGATAAGTATTTGAGCATTTGCTTTGCAGCTAAGGTAAAGGCGAGCGTTATTGTAACGGAAGCTGACAAAATCCAAAAAGGAATTGTTGATTTGGTTGTTAAACATAATATTAGGAAGCTTGCCATTGGAGCGGCATCGGAAAATTTCATGAAAGTGAAAAGGAATTCTGGGAAAGCAAATTACACTTCCAAACATGCTCCCCTGTTCTGTGAATTATGGTTTATATATAAAGGCAGACACATTTGGACAAGAGAGGCTTCTGAAACACCATGTTCTTTGTCTTCACATGCTCAACCAGATATCGCAGCCACAGAAAGCTTGAGATGTCGATCTTTTCAGTATGGTAAGAATGAACTACCCCATTTGGAACGTCTTCAACCAAATTCTGCTAGAACTACAGTATGTTCTGGAATTAGAAGCTTGGATCTGGGTGAAATCATAGAAACCGAAGCCACTAATTCATCCAAATCATCCAGTTGTAGCAGTTATTGTTCTCCCCAAAATTCTGCTGAGGTTTGTCTAGATAAGTATTCAGAGGTCATGGAAGAAAGAATTAACAGTCAACTTATTGAGACCAATAGAGAAGCTGAGGCAGCAACAGATGAGTCCTTTGCCGAACTATTGAAGTGCAGGAGGTCGGAAGTCAAAGCCATGGAGGCCATAAGGAAGGTCAATTTATTTGAATCTGCTCATGCACATGAGTTGGAGCTCAGAAAAGAGGTAGAGGATGCACTTAGAGTTACCATACTAGAACAACAAAAGCTCGTAGAAGAGAGTGAAGATATTTCCGGTAATCTACAAATGACCATGAGAAATGTGGCACTACTAGATACCCGTGTTAAGGAAACAACCCGTAGGCGAGATGAAGCTTCACACGAACTCTTGCTAATTCAAACTTCCATATCAACCTTGTGGCAAGAAAGGCAGCAGATCCGGAGACAGAAAATGGAAGCCCTTCGCTGGCTGGAACGGTGGAAAAGTCGTGGGCAAGTCGGAGCAGCTCATTACAACGGAGTCATAGGGTTTGCAGAAGAACTTCCAGAGTTAGCAGAATTTTCATTATCAGATATTGAAAATGCTACATGTAATTTTTCCAAGAGCTTTGAAATTGCGCAAGGTGGATTTGGTTGTATATATAAGGGGGAAATGTTGGGTAGAACTGTTGCTATAAAGAAGTTCCACCAACATAATGTGCAAGGACCAGCAGAGTTTCATCGAGAGGTACAAATTCTTAGTAGTCTCCAACATCCTCATTTATTGACTTTGCTTGGTGTTTGCCCCGAAGCCTGGTCAATAGTATATGAGTACCTCCCTAACGGAACTCTTCAAAACTACCTATTCCGAAAAAGTAACATCATCCCTTTGACATGGAATATCAGAGCACGAATGATTGCCGAAATTTCCAGTGCACTATGCTTCTTACATTCTTTTAAACCGGACGCTATTATCCATGGTGATCTGAAGCCTGAGACTATACTTCTTGATTCTTCACTTAGTTGCAAGATATGCGAATTCAGGTACAGCAGGCTTGTGACAGAGGAGTCTCTCTATAGTCCCAGTTTCCACTTGAGCACTGAGCCAAAGGGTGCTTTCACATATACAGATCCTGAGTTTCAGCGAACTGGGGTACTAACACCCAAGTCTGACATCTACTCCTTTGGACTTATTATTTTGCAACTCCTCACTGGTAGAACCCCAGTTGGATTAACAGTTCTAGTTCGCCATGCAGTTTCATGTGGAAAATTGTCTTCGATTCTTGATTCTTCAGCTGGAGAATGGCCTTCATCTGTGGCATCACGGTTGGTTGAACTGGGTTTGCAATGTTGTGCGCAAAATTGCAGAAACAGACCAGAGTTAACACCTACTCTTGTGAGAGAATTGGAACAGTTACATGTTTCAGAAGAGAGACCCGTGCCATCTTTTTTCTTATGTCCAATCCTTCAGGAAATAATGCATGATCCTCAAATTGCGGCAGATGGATTTACATATGAAGGGGATGCCATACGTGAATGGTTGGAAAATGGGCATGATACTTCGCCAATGACTAATTTAAAGTTGAGTCACTTGGTTCTCACTCCCAATCACTCAATTAGACTTGCCATCCAAGACTGGCTCTGCAAATCATAA 2433 0.4118 MKLLNPNPFPFSSQSQTQHMEQQSSPTNLKVHIAVGKSLHKTTTLLQWTFNHFQNAEIVLIHVYQPSPFIPTLLGKMPASQANPEVVSAFRREEREQTMRFTDKYLSICFAAKVKASVIVTEADKIQKGIVDLVVKHNIRKLAIGAASENFMKVKRNSGKANYTSKHAPLFCELWFIYKGRHIWTREASETPCSLSSHAQPDIAATESLRCRSFQYGKNELPHLERLQPNSARTTVCSGIRSLDLGEIIETEATNSSKSSSCSSYCSPQNSAEVCLDKYSEVMEERINSQLIETNREAEAATDESFAELLKCRRSEVKAMEAIRKVNLFESAHAHELELRKEVEDALRVTILEQQKLVEESEDISGNLQMTMRNVALLDTRVKETTRRRDEASHELLLIQTSISTLWQERQQIRRQKMEALRWLERWKSRGQVGAAHYNGVIGFAEELPELAEFSLSDIENATCNFSKSFEIAQGGFGCIYKGEMLGRTVAIKKFHQHNVQGPAEFHREVQILSSLQHPHLLTLLGVCPEAWSIVYEYLPNGTLQNYLFRKSNIIPLTWNIRARMIAEISSALCFLHSFKPDAIIHGDLKPETILLDSSLSCKICEFRYSRLVTEESLYSPSFHLSTEPKGAFTYTDPEFQRTGVLTPKSDIYSFGLIILQLLTGRTPVGLTVLVRHAVSCGKLSSILDSSAGEWPSSVASRLVELGLQCCAQNCRNRPELTPTLVRELEQLHVSEERPVPSFFLCPILQEIMHDPQIAADGFTYEGDAIREWLENGHDTSPMTNLKLSHLVLTPNHSIRLAIQDWLCKS* 811
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr2g3340 810 SUPERFAMILY Protein kinase-like (PK-like) 450 726 IPR011009 -
Mtr2g3340 810 MobiDBLite consensus disorder prediction 7 26 - -
Mtr2g3340 810 Coils Coil 284 304 - -
Mtr2g3340 810 Gene3D HUPs 24 154 IPR014729 -
Mtr2g3340 810 SUPERFAMILY Adenine nucleotide alpha hydrolases-like 46 153 - -
Mtr2g3340 810 PANTHER OS10G0100500 PROTEIN 19 809 - -
Mtr2g3340 810 PANTHER OS02G0152300 PROTEIN 19 809 - -
Mtr2g3340 810 ProSiteProfiles Protein kinase domain profile. 466 732 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr2g3340 810 SMART Ubox_2 743 806 IPR003613 GO:0004842|GO:0016567
Mtr2g3340 810 Gene3D Transferase(Phosphotransferase) domain 1 539 739 - -
Mtr2g3340 810 Pfam Protein tyrosine and serine/threonine kinase 471 722 IPR001245 GO:0004672|GO:0006468
Mtr2g3340 810 CDD STK_N 30 180 - -
Mtr2g3340 810 Gene3D Phosphorylase Kinase; domain 1 443 538 - -
Mtr2g3340 810 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 740 810 IPR013083 -
Mtr2g3340 810 MobiDBLite consensus disorder prediction 1 26 - -
Mtr2g3340 810 CDD RING-Ubox_WDSUB1_like 744 785 - -
Mtr2g3340 810 SUPERFAMILY RING/U-box 737 809 - -
Mtr2g3340 810 Pfam U-box domain 740 809 IPR003613 GO:0004842|GO:0016567
Mtr2g3340 810 ProSiteProfiles U-box domain profile. 739 810 IPR003613 GO:0004842|GO:0016567
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr2g3340 Mtr-Chr2 47497726 47503167 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr2g3340 30 807 U-box Gene Family AT2G45910 36.228 1.14e-171 514
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-IXb Mtr2g3340 PK_Tyr_Ser-Thr 6.3e-34 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr2g3340 - - gmx:100788846 1269.6
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr2g3340 2 47497726 47503167 Mtr2g3340 2 47497726 47503167 ECH