Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr2g3308 ATGATGTTGGATTGGAAAAAACATGGTTTGTTTGTCTGTGTTTTGTATATGTTGTTACCTTTGTTATGTTTTTGTGCAACTTTTGTTCCATCAGATAATTACCTTATAGATTGTGGATCAACTACAACCACTTCAGTTGGTAACCGTAATTTCAGTTCAGATAGTTTCCATAAGAAGTTACTTTCAACTCAGCAAGAGATTCTTGCTAGTACTAGCTCAAAATCTGTTTCTGATGTTGGTGATGAATCGCCTCTTTATCAAACTGCAAGAATCTTTACTGGATCTTCAAAGTACACTTTTCCAATTAACCAAAAGGGGAGACACTGGATCCGGTTTTATTTCTTTCCATTTATTTATGATAGATACAATTTGAATGCTGCAAAATTCTCTGTTGCAACACAAACTTTTGTTCTTCTTAGTGGATTTACTGCTCAGAAGAGTCCTGTTATGAAGGAGTATTCTATCAATGTTAACACAGATACTCTTGTTATTACTTTTAAACCTTCTGATGATTCTGTTGCATTTGTGAATGCAATTGAAGTTGTTTCAGTTCCGGATGAACTCATTGCTGATGAGGCTCCTACCTTGAGTCCGGTATCAACGTTTTCTGGATTGGGGTTTCAGGCTTTGGAGACTGTTTGGAGGGTTAACATGGGTGGTCCAGTTGTTACCTCTGGAGAGGACCCTCTTTATAGAACTTGGATTTCGGATCAAAAGTATCTTCTAGAATCGAGCCTTGCCAATGATGTTTCAAATCTTGTTGGTGTTGATTTTGCGGATGGAGGGCCGACAGAGAACATTGCCCCGCGTAGTGTTTACGGTACTGTCGCAGAGATGAACACGAACACGAGCGGTGGTGATGCTAATCTTAATTTCAATGTGACGTGGCAGTTTGATACGGAGCCAGGATTTCAATACCTTGTTCGAACTCACTTTTGTGATATAGTCAGTAAAGGTCTCAATACACTTTATTTCAATGTTTATATCGACTCGTTGACGGTTGTTAAGGATCTTGATCTTGCTTCTAAAAGTAGTAATGTTTTGTCCGTTCCATATTATCAAGATTCTGTTACGCCTTTAGCCGACGGCAATAAACTTCGTGTAAGTATTGGCCCTTCCCCTTTGAGTAAGGACAGCCCTAATGCTATTTTGAATGGACTGGAGATCTTGAAAATGAACAATTCTATAGGCAGTCTAAGTGCAGATGCGGCATCTGGTGCTGGGGGTACTACTTCTGGTTCGAGTTCTAGCAAGGTTGGTGTGATAGCTGGTGTGAGTGTTGGGGTAGTGAGTGTATTGGTCTTGGCCGGAGTTTGTTGTGTACTGTGCAGGAAAAAGAAGAGGTTGGCAAGACAAAGGCAGTCGAAGACATGGATTCCTTTATCCGTGAATGATGCAACATCCCATACAATGGGAAGTAAATATTCCAATGGCACGACAATAAGCGCTGCTTCGAACTTCGAGTACCGTGTCCCTTTTGCGGAAGTTCAGGAGGGTACAAATAATTTTGATGAGAGTTGGGTTATTGGGGTTGGTGGTTTTGGGAAAGTATACAAGGGAGAGTTAAGGGATGGTAGAAAAGTGGCAGTGAAGAGGGGGAATCCGCGGTCCCAGCAAGGGATTGCTGAATTTAGAACTGAAATTGAAATGTTGTCTCAGTTCCGTCATCGTCATTTGGTGTCCTTGATTGGTTATTGTGATGAAAATAATGAAATGATCCTGATATATGAATACATGGAGAAGGGAACACTCAAGGGTCATCTGTATGGTTTGGGACTACCAAGCTTAAGTTGGAAGGAGAGACTTGATATATGCATTGGATCTGCCAGAGGACTTCATTACCTTCACACTGGCTATGCTAAAGCGGTTATTCATCGTGACGTGAAGTCTGCAAATATCTTACTTGATGAGAACCTAATGGCTAAAGTTGCTGATTTTGGATTGTCAAAAACCGGTCCTGAGCTCGATCAAACGCACGTGAGCACGGCTGTCAAGGGGAGTTTTGGGTACCTTGATCCAGAGTATTTCAGGAGGCAACAACTGACAGAAAAATCAGACGTATATTCCTTTGGGGTAGTTCTGTTTGAAGTTCTTTGTGCAAGGCCAGTTATAGATCCATCGCTTCCTAGGGAAATGGTGAACTTAGCAGAATGGGCAATGAAATATCAGAAAAAAGGACAGCTGGAGCAAATCATCGATACAGCTCTTCAAGGGAAAATCAAAGCAGATTCTCTTAGGAAGTTCGCTGAAACTGCTGAGAAATGTTTGGCTGATTATGGTGTTGACAGGCCTTCCATGGGAGATGTCTTGTGGAATTTGGAATATGCTCTTCAACTTCAAGAGGCCGTGGTTCAAGGTGATCCTGAAGAAAACAGTACAAATATGATTGGCGAACTATCTCCACAAGTCAACAATTTCAACCAGGACGCAAATGTTTCTTCTTCTGCCTCTGCTGTGCCATTTGAAGCTTCAACCGTTGATGATCTATCTGGTGTTTCTATGAGTAGGGTATTCTCACAGTTGGTGAAGTCCGAGGGTAGATGA 2544 0.4151 MMLDWKKHGLFVCVLYMLLPLLCFCATFVPSDNYLIDCGSTTTTSVGNRNFSSDSFHKKLLSTQQEILASTSSKSVSDVGDESPLYQTARIFTGSSKYTFPINQKGRHWIRFYFFPFIYDRYNLNAAKFSVATQTFVLLSGFTAQKSPVMKEYSINVNTDTLVITFKPSDDSVAFVNAIEVVSVPDELIADEAPTLSPVSTFSGLGFQALETVWRVNMGGPVVTSGEDPLYRTWISDQKYLLESSLANDVSNLVGVDFADGGPTENIAPRSVYGTVAEMNTNTSGGDANLNFNVTWQFDTEPGFQYLVRTHFCDIVSKGLNTLYFNVYIDSLTVVKDLDLASKSSNVLSVPYYQDSVTPLADGNKLRVSIGPSPLSKDSPNAILNGLEILKMNNSIGSLSADAASGAGGTTSGSSSSKVGVIAGVSVGVVSVLVLAGVCCVLCRKKKRLARQRQSKTWIPLSVNDATSHTMGSKYSNGTTISAASNFEYRVPFAEVQEGTNNFDESWVIGVGGFGKVYKGELRDGRKVAVKRGNPRSQQGIAEFRTEIEMLSQFRHRHLVSLIGYCDENNEMILIYEYMEKGTLKGHLYGLGLPSLSWKERLDICIGSARGLHYLHTGYAKAVIHRDVKSANILLDENLMAKVADFGLSKTGPELDQTHVSTAVKGSFGYLDPEYFRRQQLTEKSDVYSFGVVLFEVLCARPVIDPSLPREMVNLAEWAMKYQKKGQLEQIIDTALQGKIKADSLRKFAETAEKCLADYGVDRPSMGDVLWNLEYALQLQEAVVQGDPEENSTNMIGELSPQVNNFNQDANVSSSASAVPFEASTVDDLSGVSMSRVFSQLVKSEGR* 848
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr2g3308 847 ProSitePatterns Serine/Threonine protein kinases active-site signature. 623 635 IPR008271 GO:0004672|GO:0006468
Mtr2g3308 847 Gene3D - 33 184 - -
Mtr2g3308 847 Gene3D - 208 394 - -
Mtr2g3308 847 Pfam Malectin-like domain 36 391 IPR024788 -
Mtr2g3308 847 Gene3D Transferase(Phosphotransferase) domain 1 579 796 - -
Mtr2g3308 847 CDD STKc_IRAK 509 774 - -
Mtr2g3308 847 SUPERFAMILY Protein kinase-like (PK-like) 479 774 IPR011009 -
Mtr2g3308 847 ProSiteProfiles Protein kinase domain profile. 503 776 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr2g3308 847 Pfam Protein tyrosine and serine/threonine kinase 508 769 IPR001245 GO:0004672|GO:0006468
Mtr2g3308 847 SMART serkin_6 503 776 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr2g3308 847 Gene3D Phosphorylase Kinase; domain 1 464 578 - -
Mtr2g3308 847 PANTHER RECEPTOR-LIKE PROTEIN KINASE HERK 1 20 837 - -
Mtr2g3308 847 ProSitePatterns Protein kinases ATP-binding region signature. 509 531 IPR017441 GO:0005524
Mtr2g3308 847 PANTHER OS07G0166700 PROTEIN 20 837 IPR045272 GO:0004714|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr2g3308 Mtr-Chr2 47153167 47156650 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr2g3308 21 847 Receptor kinase-like Gene Family AT3G46290 64.699 0.0 1071
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CrRLK1L-1 Mtr2g3308 Malectin_like 7.8e-36 CL0202
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr2g3308 - - gmx:100806488 1215.68
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr2g3308 2 47153167 47156650 Mtr2g3308 2 47153167 47156650 ECH
Mtr2g3308 2 47153167 47156650 Mtr4g1807 4 31110035 31113389 ECH
Mtr2g3308 2 47153167 47156650 Mtr4g1807 4 31110035 31113389 PCT