Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr2g3304 ATGTATGCACACTCTAATTCCAACAATATTCCATTCTCAACACCCTTTCTTCTTCACTCTTCTTCTCCATTTATGGAACAAAACAACTCCATCCCTGATTTCACTGAGTTAGACTCATTCCAAGACACTCTCTCCCAACTGAATAACTCTGAGTTGAGCAGTGGCTATAGCAGCTATGGTGGATCACCTTCACCAAGTACTCCAATCTTGATGCAAAGGAGCATTAGCAGTCATTCCCTTCAGTACAATAATGGGACTCACCATTATCCCCTCTCTGCTTTTTTTGCTGACTTGCTCGACTCAGACGATGCTCCGGTGAGGAAAGTTTGCAGTACCGGCGATTTGCAGAGGATTAACGGAATGCAACATAATCATCATCATCACGTGGATAGTCCATTGTCTAGTGAAAGTAGTATGATCATAGAAGGTATGAGCAGAGTTTGTCCATATAGCCCAGAAGAAAAGAAAGTGAGAATTGAAAGATACAGAATAAAGAGGAATCAGAGGAACTTTAACAAGAAAATTAAGTATGTTTGCCGAAAGACATTGGCAGATAGGAGGCCACGAATCAGAGGACGGTTTGCGAGGAATGATGAAATTGATAAGAAACCTATAGTTGAGTGGAGCCACATTGGTGGTGGGGAGGAAGAGGATGAAGAAGATGAAAAATGGAATAATATCTTTAATTCCATAGTTGCTGCAAATCTTGTTCATGATGAGTTTCAAGGAAGTTCCTCATTTGGTCTATTATATTAG 756 0.4048 MYAHSNSNNIPFSTPFLLHSSSPFMEQNNSIPDFTELDSFQDTLSQLNNSELSSGYSSYGGSPSPSTPILMQRSISSHSLQYNNGTHHYPLSAFFADLLDSDDAPVRKVCSTGDLQRINGMQHNHHHHVDSPLSSESSMIIEGMSRVCPYSPEEKKVRIERYRIKRNQRNFNKKIKYVCRKTLADRRPRIRGRFARNDEIDKKPIVEWSHIGGGEEEDEEDEKWNNIFNSIVAANLVHDEFQGSSSFGLLY* 252
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr2g3304 251 PANTHER CCT MOTIF PROTEIN 3 251 - -
Mtr2g3304 251 Pfam CCT motif 157 197 IPR010402 GO:0005515
Mtr2g3304 251 ProSiteProfiles CCT domain profile. 155 197 IPR010402 GO:0005515
Mtr2g3304 251 PANTHER ZINC FINGER PROTEIN CONSTANS-LIKE 4 3 251 IPR045281 GO:0009909
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr2g3304 Mtr-Chr2 47116750 47119032 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr2g3304 151 203 C2C2-CO-like Transcription Factor Family AT5G15850 45.283 1.68e-11 61.6
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Mtr2g3304 CCT 5.2e-16 CL0281
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr2g3304 - - gmx:100820236 282.722
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr2g3304 2 47116750 47119032 Mtr2g3304 2 47116750 47119032 ECH
Mtr2g3304 2 47116750 47119032 Mtr4g1805 4 31098188 31101822 PCT