Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr2g3297 ATGGCGTGGTCTGGTCTCTACGTCCTCCATAGGGATTACAAGCTTGCGCACCAATCCCTTTCTCAACAAGTACCATATGATGAAAGTGATGATGAAAGAGAAGATGATTCTATACATGATCAACTTTCCTTGGACGTGAAGAATTTGAATTTGAAAGACGAGGTTTCCGCGGATGAAAATGTCGCAAAGAAATTTACTTTTCATAAGCTTGCTGTTGCAACAGGGAATTTCAAGGCAGATTGCTTTGTTCGTGAAGTAGGGTTTGGAAAGGTTTATGAAGGTTACATCGAGAAAATAAATCAGGTTGTTACAATAAAGCAGCTTGACCCTATCGTGCTTCAAGGAAAAAGGAAATTTGTTTCTGAAGCGTTAAGACTCAGTTTAGCAGAACACCCAAATCTTGTCAAGTTAATTGGGTTTTGTGCTGAGGGAGAACAAAGGCTGTTGGTTTATGAGAACATGCCATTAGGATCTTTGGAGAACCATTTGCATGATCTTTCCCCCGGGAAAAAACCGCTAGATTGGAATACAAGAATGAAAATAGCTGTTGGTGTAGCTAGAGGTTTGGAGCATTTGCTTGATGAAATGAAGCCTCCCGTCATATACCGTGACCTCAAATGCTCCACCATTTTGTTAGGCGAAGATTATCATCCCAAGCTAACTGATTTTGGCTTTGCAAAAGTAGACCCAATTGGTAATAAGAATTTTTCGACAAGTGTTATGTGCTCATATGGGTATGGTGCTCTGGATTACGCAGTGATGGGTCCATTGGTAGTCAAGTCTAACATTTATAGCTTCGTTGTTGTTCTTTTGGAGCTCATTACAGGCAGAAAGGCCATCGATTATAGAAGACCTGCTGATGAAAAAATTCTAGTTGCATGGGCATGGCCGTTAATCAGAGACCGGCGATTCTCGGAGTTGGTGGATCCATTGCTTGAAGGTCGATATCCAGTGTGGGGTTTGTACCGGGCTCTCACTGTTGCTGCTATGTGTGTTTTGGAGGAGCAGCCTGATGTGCCACCTTCTATAGCCGATGTGGCCACAGTTCTAAATTGCATTGCTACACATCAGTACGATCCACAAGTTCATCCGATACAAAACTCGTGA 1107 0.4237 MAWSGLYVLHRDYKLAHQSLSQQVPYDESDDEREDDSIHDQLSLDVKNLNLKDEVSADENVAKKFTFHKLAVATGNFKADCFVREVGFGKVYEGYIEKINQVVTIKQLDPIVLQGKRKFVSEALRLSLAEHPNLVKLIGFCAEGEQRLLVYENMPLGSLENHLHDLSPGKKPLDWNTRMKIAVGVARGLEHLLDEMKPPVIYRDLKCSTILLGEDYHPKLTDFGFAKVDPIGNKNFSTSVMCSYGYGALDYAVMGPLVVKSNIYSFVVVLLELITGRKAIDYRRPADEKILVAWAWPLIRDRRFSELVDPLLEGRYPVWGLYRALTVAAMCVLEEQPDVPPSIADVATVLNCIATHQYDPQVHPIQNS* 369
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr2g3297 368 Gene3D Transferase(Phosphotransferase) domain 1 154 360 - -
Mtr2g3297 368 PANTHER OS07G0668900 PROTEIN 16 365 - -
Mtr2g3297 368 Gene3D Phosphorylase Kinase; domain 1 39 152 - -
Mtr2g3297 368 SUPERFAMILY Protein kinase-like (PK-like) 62 348 IPR011009 -
Mtr2g3297 368 ProSiteProfiles Protein kinase domain profile. 77 359 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr2g3297 368 PANTHER SERINE/THREONINE-PROTEIN KINASE PBL5-RELATED 16 365 - -
Mtr2g3297 368 Pfam Protein tyrosine and serine/threonine kinase 88 278 IPR001245 GO:0004672|GO:0006468
Mtr2g3297 368 SMART serkin_6 77 327 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr2g3297 Mtr-Chr2 47044987 47048245 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr2g3297 33 355 Glycoside Hydrolase AT3G07070 49.695 1.21e-106 317
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-1 Mtr2g3297 PK_Tyr_Ser-Thr 8e-27 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr2g3297 - - mtr:MTR_2g095920 471.085