Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr2g3296 ATGGATGTGAAGAAGATCGAGAGCATTGATTCTAGCCATAGAGAGAAGCACAACAAGGAAGTTGATTTGAGTGTGAATGAGAAAACGGAAGATGAATTAAAAGATGGGGTTTCCACGAATGGAAAACTTGCAAAGACATTTACTTTAAATGAGCTTGCAGCTGCAACAGGGAATTTTAGTGCAAATTGCTTTGTTGGTGAAGGAGGGTTTGGCAAGGTTTATAAGGGTTACCTCCAGAAAACTAATCAGTTTGTTGCAATAAAGCAACTTGACCCTAAAGGCATTCAAGGAACTAGAGAATTTGTTGTTGAAGTGTTAACACTTAGTTTGGCAGAACACACAAATCTTGTCAAGTTATTAGGGTTTGGTGCTGAGGGGGATCAAAGGCTTTTGGTTTATGAGTACATGCCTTTGGGATCTTTGGAGAGTCATTTGCATGATCTTCCTCCTGGGAAAAACCCACTGGACTGGAATACCAGAATGAGAATAGCTGCTGGTGTAGCTAAAGGTTTGGAGTATTTGCATGATGAAATGAAGCCTCCTGTCATATACCGTGACCTCAAATGCTCCAACATTTTGTTAGGCAATGATTATCATCCCAAGTTATCTGATTTTGGCTTGGCAAAAATAGGCCCAATGGGTGATCAGACTCATGTTTCAACAAGAGTTATGGGAACACATGGCTACTGTGCTCCAGATTATGGAATGACAGGTCAATTGACGTTCAAGTCTGACATTTATAGCTTTGGAGTTGCTCTTTTGGAGCTTATCACTGGCAGAAAGGCCTATGACGAGAGTAAACCTTCTAAAAAACGACATCTAGTCAAATGGGCAACTCCGTTATTCAGAGACCAAAAAAATTTCTCAAAGATGGTGGATCCATTGCTCAAAGGGCAATATCCAGCAAGGGGTTTGTACCAGGCTCTTGCTATTGCTTCTATGTGTGTTGTAGAGCAGACTAATATGCGGCCGGTTATAGCAGATGTGGTCTCAGCTCTAGATTTCCTTGCTTCTCAAAAATATGAACCACGGGTTCATCCAATACAAAGGTCGAGATATGGTTCATCTTCTTCAAGAAGTAGGGCTAAAGGTCATAGACGCGTTACTAGTAATGTCTCAGAGAAAGACAAACTGGGAAATTAG 1143 0.4103 MDVKKIESIDSSHREKHNKEVDLSVNEKTEDELKDGVSTNGKLAKTFTLNELAAATGNFSANCFVGEGGFGKVYKGYLQKTNQFVAIKQLDPKGIQGTREFVVEVLTLSLAEHTNLVKLLGFGAEGDQRLLVYEYMPLGSLESHLHDLPPGKNPLDWNTRMRIAAGVAKGLEYLHDEMKPPVIYRDLKCSNILLGNDYHPKLSDFGLAKIGPMGDQTHVSTRVMGTHGYCAPDYGMTGQLTFKSDIYSFGVALLELITGRKAYDESKPSKKRHLVKWATPLFRDQKNFSKMVDPLLKGQYPARGLYQALAIASMCVVEQTNMRPVIADVVSALDFLASQKYEPRVHPIQRSRYGSSSSRSRAKGHRRVTSNVSEKDKLGN* 381
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr2g3296 380 MobiDBLite consensus disorder prediction 347 380 - -
Mtr2g3296 380 Gene3D Transferase(Phosphotransferase) domain 1 136 352 - -
Mtr2g3296 380 MobiDBLite consensus disorder prediction 1 27 - -
Mtr2g3296 380 ProSiteProfiles Protein kinase domain profile. 59 336 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr2g3296 380 SMART serkin_6 59 336 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr2g3296 380 ProSitePatterns Serine/Threonine protein kinases active-site signature. 182 194 IPR008271 GO:0004672|GO:0006468
Mtr2g3296 380 Pfam Protein kinase domain 65 273 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr2g3296 380 PANTHER SERINE/THREONINE-PROTEIN KINASE PBL5-RELATED 19 365 - -
Mtr2g3296 380 SUPERFAMILY Protein kinase-like (PK-like) 46 357 IPR011009 -
Mtr2g3296 380 PANTHER OS07G0668900 PROTEIN 19 365 - -
Mtr2g3296 380 ProSitePatterns Protein kinases ATP-binding region signature. 65 88 IPR017441 GO:0005524
Mtr2g3296 380 Gene3D Phosphorylase Kinase; domain 1 10 135 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr2g3296 Mtr-Chr2 47037998 47040239 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr2g3296 24 338 Glycoside Hydrolase AT3G07070 58.413 3.11e-139 401
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-1 Mtr2g3296 Pkinase 7.4e-43 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr2g3296 - - mtr:MTR_2g095920 567.385
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr2g3296 2 47037998 47040239 Mtr2g3296 2 47037998 47040239 ECH
Mtr7g1331 7 27578298 27581858 Mtr2g3296 2 47037998 47040239 ECH
Mtr4g0650 4 8194777 8202943 Mtr2g3296 2 47037998 47040239 ECH