Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr2g3295 ATGTGTGTTAATTTATATTCAATGGTTACCAATAATTGGAGACCTAATCAAGGTGCTGAACCGAATATGGATACTAGTGATTGGAGAGGTCAATTGCAGCCTGAATCACGCCAAAGAATTGTCAACAAAATTATGGACACATTAAAAAGGCATCTTCCTGTTTCTGGTCAAGAAGGATTGCATGAACTTCGGAAGATTGCCCAAAAGTTTGAAGATAAGATTTATACTGCTGCAACAAGCCAGTCTGATTATCTACGGAAAATATCTTTGAAGATGCTTACGATGGAGACTAAATCCCAGGGCACTATTGCCAACAATATACCCCCGAATCAAGTTGGCCCTAGCAATCAACCTCCTTATCCAGATGATGCAAGTAAATATGATTCTAAACATGATCAACTTTCCTTGGACGTGAAGAAGTTTGAAAGCAACAACTCTAGCTGTAAAGTGAAACAAAGTAATATTTGTTATGATAAAGTCAAAGTTAATTTGAATTTGAATGTGAGTGAGAAAAGGGAAGATGATTCCAAAAACGATCAACTTTCGTTGGACGTGAAGAATTTTTATTTAAAAGACGGGGTTTCCACGGATGAAAAAGTCGCAAAGATTTTTACTTTTGATGAGCTTGCAGCTGCAACAAAGAGTTTTAGGGTAGATTGCTTTGTTGGTGAAGGAGGGTTTGGCAAGGTTTATAAGGGTTACATCAAGAAAATTAATCAGTTTGTTGCAATAAAGCAACTTGACCCTAATGGACTTCAAGGAACAAGAGAATTTGCTGTTGAAGTGTTAACACTTAGTTTGGCAGAACACCCAAATCTTGTCAAGTTATTAGGATTTTGTGCTGAGGGAGAGCAGAGGCTTTTGGTTTATGAGTACATGCCTTTGGGATCTTTGGAGAATCATTTGCATGATCTTCCTCCCGGGAAAAAACCATTGGATTGGAATACACGAATGAGAATAGCTGCTGGTGTAGCTAAAGGTTTGGAGTATTTGCATGATGAAATGAAGCCTCCTGTCATATACCGTGACCTCAAATGCTCCAACATTTTGTTAGGCGATGATTATCATCCCAAGTTATCCGATTTTGGCTTGGCAAAAGTAGGTCCAATCGGTGATATGACTCATGTTTCAACAAGAGTTATGGGAACATATGGCTACTGTGCTCCAGATTACGCAATGACGGGTCAATTGACGTCCAAGTCTGACATTTATAGCCTTGGAGTTGCTCTTTTGGAGCTTATCACAGGCAGAAAGGCCTTCGACCCTAGTAAACCTGCTAAAGAACAAAATCTTGTTGCATGGGCATATCCGTTATTCAAAGAACAAAGAAAATTCTCAAAGATGGTGGATCCATTGCTTGAAGGTCAATATCCAGCGAGGGGTTTGTACCAAGCCCTTGCTGTTGCTGCTATGTGTGTTGAAGAGCAGTCTAGTATGCGGCCGGTTATAGCAGATGTGGTCGCAGCTCTAGATTTCATTGCTTCACATAAATATGATCCACAAGTTCATCCAATACAAAGCTCGAGATAA 1530 0.3961 MCVNLYSMVTNNWRPNQGAEPNMDTSDWRGQLQPESRQRIVNKIMDTLKRHLPVSGQEGLHELRKIAQKFEDKIYTAATSQSDYLRKISLKMLTMETKSQGTIANNIPPNQVGPSNQPPYPDDASKYDSKHDQLSLDVKKFESNNSSCKVKQSNICYDKVKVNLNLNVSEKREDDSKNDQLSLDVKNFYLKDGVSTDEKVAKIFTFDELAAATKSFRVDCFVGEGGFGKVYKGYIKKINQFVAIKQLDPNGLQGTREFAVEVLTLSLAEHPNLVKLLGFCAEGEQRLLVYEYMPLGSLENHLHDLPPGKKPLDWNTRMRIAAGVAKGLEYLHDEMKPPVIYRDLKCSNILLGDDYHPKLSDFGLAKVGPIGDMTHVSTRVMGTYGYCAPDYAMTGQLTSKSDIYSLGVALLELITGRKAFDPSKPAKEQNLVAWAYPLFKEQRKFSKMVDPLLEGQYPARGLYQALAVAAMCVEEQSSMRPVIADVVAALDFIASHKYDPQVHPIQSSR* 510
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr2g3295 509 Gene3D Coactivator CBP, KIX domain 27 105 IPR036529 GO:0003712|GO:0006355
Mtr2g3295 509 ProSitePatterns Serine/Threonine protein kinases active-site signature. 339 351 IPR008271 GO:0004672|GO:0006468
Mtr2g3295 509 SMART serkin_6 216 493 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr2g3295 509 PANTHER OS07G0668900 PROTEIN 145 508 - -
Mtr2g3295 509 PANTHER SERINE/THREONINE-PROTEIN KINASE PBL5-RELATED 145 508 - -
Mtr2g3295 509 Gene3D Transferase(Phosphotransferase) domain 1 293 504 - -
Mtr2g3295 509 SUPERFAMILY Protein kinase-like (PK-like) 202 502 IPR011009 -
Mtr2g3295 509 ProSitePatterns Protein kinases ATP-binding region signature. 222 245 IPR017441 GO:0005524
Mtr2g3295 509 Gene3D Phosphorylase Kinase; domain 1 190 292 - -
Mtr2g3295 509 SUPERFAMILY Kix domain of CBP (creb binding protein) 25 98 IPR036529 GO:0003712|GO:0006355
Mtr2g3295 509 CDD STKc_IRAK 222 491 - -
Mtr2g3295 509 MobiDBLite consensus disorder prediction 102 128 - -
Mtr2g3295 509 ProSiteProfiles Protein kinase domain profile. 216 493 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr2g3295 509 Pfam KIX domain 26 105 IPR036546 -
Mtr2g3295 509 Pfam Protein kinase domain 221 430 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr2g3295 Mtr-Chr2 47015915 47030975 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr2g3295 191 495 Glycoside Hydrolase AT3G07070 61.639 1.01e-141 412
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-1 Mtr2g3295 Pkinase 2.8e-43 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr2g3295 - - mtr:MTR_2g095920 996.882