Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr2g3294 ATGAGTTGTTTTTGTTTCAAAGCCAAATCACGAGGAAAGATCGAAAGCAATCATTCTAGCCGTAGTGAGGACCACAGTAATACCACTTCAGCTGATAAGGTCAAAGTTGATTTGAATTTGAGTGAGTTGAAAGATAAAAAGGAAGATGATTCTAAACATGATCAACTTTCCTTGGACGTGAAGAATTTGAATTTAAACGACGGGGTTTCACCGGATGGAAAAGTTGCACAGACATTTACTTTTGCTGAGCTTGCAGCTGCAACAGAGAATTTTAGGGCAGATTGCTTTGTTGGTGAAGGAGGGTTTGGTAAGGTTTATAAGGGTTACCTCGAGAAAATTAATCAGGTTGTTGCAATAAAGCAACTTGATCGTAACGGGGTTCAAGGAATCAGGGAATTTGTTGTTGAAGTGATAACACTAGGTTTAGCAGACCACCCAAATCTTGTCAAGTTATTAGGGTTTTGTGCGGAAGGCGAGCAAAGACTATTGGTTTATGAGTACATGCCATTGGGATCATTGGAGAACCATTTGCATGACCTTTCGCCCGGACAAAAACCACTGGATTGGAACACAAGAATGAAAATAGCTGCTGGTGCAGCCAGGGGTTTGGAGTATTTGCATGATAAAATGAAGCCTCCTGTTATATACCGCGACCTCAAATGCTCTAACATTTTGTTAGGTGAGGATTATCATTCCAAGTTGTCTGATTTTGGCCTGGCAAAAGTAGGTCCAATCGGTGATAAGACCCATGTTTCGACAAGAGTTATGGGAACATATGGGTACTGTGCTCCAGATTACGCAATGACAGGTCAGTTGACGTTCAAGTCCGACATTTATAGCTTTGGAGTTGCTCTTTTGGAGCTCATTACAGGCAGAAAGGCCATCGATCATAAAAAACCTGCTAAAGAACAAAATCTAGTTGCATGGGCAAGGCCATTATTCAGAGACCGAAGAAGATTCTCTGAAATGATAGATCCATTGCTTGAAGGTCAATATCCAGTGAGGGGTTTGTACCAAGCTCTTGCTATTGCTGCTATGTGTGTTCAAGAGCAGCCTAATATGCGTCCGGTTATAGCTGATGTGGTCACAGCTCTAAATTACCTAGCTTCACAAAAATATGATCCGCAAATTCATCATATACAAGGCTCGAGAAAAGGTTCATCTTCTCCAAGAAGTAGGAGTGAACGTCATAGACGTGTTACTAGCAAGGACTCTGAGACAGACAGATTTGGAGATTAG 1239 0.4149 MSCFCFKAKSRGKIESNHSSRSEDHSNTTSADKVKVDLNLSELKDKKEDDSKHDQLSLDVKNLNLNDGVSPDGKVAQTFTFAELAAATENFRADCFVGEGGFGKVYKGYLEKINQVVAIKQLDRNGVQGIREFVVEVITLGLADHPNLVKLLGFCAEGEQRLLVYEYMPLGSLENHLHDLSPGQKPLDWNTRMKIAAGAARGLEYLHDKMKPPVIYRDLKCSNILLGEDYHSKLSDFGLAKVGPIGDKTHVSTRVMGTYGYCAPDYAMTGQLTFKSDIYSFGVALLELITGRKAIDHKKPAKEQNLVAWARPLFRDRRRFSEMIDPLLEGQYPVRGLYQALAIAAMCVQEQPNMRPVIADVVTALNYLASQKYDPQIHHIQGSRKGSSSPRSRSERHRRVTSKDSETDRFGD* 413
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr2g3294 412 MobiDBLite consensus disorder prediction 389 412 - -
Mtr2g3294 412 MobiDBLite consensus disorder prediction 378 412 - -
Mtr2g3294 412 Gene3D Phosphorylase Kinase; domain 1 76 167 - -
Mtr2g3294 412 ProSitePatterns Serine/Threonine protein kinases active-site signature. 214 226 IPR008271 GO:0004672|GO:0006468
Mtr2g3294 412 PANTHER SERINE/THREONINE-PROTEIN KINASE PBL5-RELATED 13 399 - -
Mtr2g3294 412 MobiDBLite consensus disorder prediction 1 32 - -
Mtr2g3294 412 MobiDBLite consensus disorder prediction 11 32 - -
Mtr2g3294 412 SUPERFAMILY Protein kinase-like (PK-like) 78 381 IPR011009 -
Mtr2g3294 412 ProSitePatterns Protein kinases ATP-binding region signature. 97 120 IPR017441 GO:0005524
Mtr2g3294 412 ProSiteProfiles Protein kinase domain profile. 91 368 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr2g3294 412 CDD STKc_IRAK 97 366 - -
Mtr2g3294 412 Gene3D Transferase(Phosphotransferase) domain 1 168 385 - -
Mtr2g3294 412 SMART serkin_6 91 368 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr2g3294 412 Pfam Protein kinase domain 96 361 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr2g3294 412 PANTHER OS07G0668900 PROTEIN 13 399 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr2g3294 Mtr-Chr2 47011186 47014442 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr2g3294 1 370 Glycoside Hydrolase AT3G07070 56.604 2.00e-150 431
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-1 Mtr2g3294 Pkinase 9.4e-43 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr2g3294 - - gmx:100794680 615.15