Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr2g3282 ATGCAGAAATCAGGTTACGGTTCAGATGGAATATACAGGTCCTTAAGACCTTCCCTTATCTTACCAAAAAATCCAAACCTCTCTCTCGTAACACACCTCTTCAACAAAGTCACTTCTTCCCCAAACAAAACCGCTCTTATAGATGCCGATTCTTCTCAAACACTAACCTTCGCTCAATTAAAATCCCTTACAATTAAACTCGCTCACTCTTTAATTAAAATCGGTTTAACCAAAAACGACGTCGTTCTCTTCCTCGCTCCTAATAGTTATCTCTACCCTGTTTTCTTCCTCGCCGTTGCTTCCATCGGTGCCGTCGCTTCCACCGTAAATCCACAATACACCACCGTTGAAGTTTCTAAACAAGCTAAAGATTCAAATCCGAAACTCATTATCACCGTCGCTGAATTATGGGAGAAAGTAAATCACCTCAATATCCCCGCCGTTTTTCTCAATTCCTCCGGCGTTGCAACGCCGGATACAGTTACGAGTTTCGAATCGTTTGTCAAACTCGGTGAATCAGCAACCGAATTTCCAAAAATTGACGTGAAACAAACCGATACGGCGGCGTTGTTGTATTCCTCGGGTACTACAGGTGTAAGCAAAGGAGTGATTCTAACTCACCAGAATTTCATTGCTTCTGCTGCAATGATTTCAATGGATGATGAATTGAACGGTGAAATCAACGATGTGTATCTCGTTGTTCTACCAATGTTTCATGTGTTTGGACTTGCGGTGATAACGTATTCGCAGCTTCAGAGAGGGAATGCGATTGTTTCGTTGAAGCGGTTTGAGTTTGAAGTGGTTTTGAAAACGATTGAGAAGTTTAGGGTTACGAGATTATGGATTGTGCCACCGATTGTACTCGCTCTAGCGAAACATGGTTTGGTTGATAAGTATGATCTTTCGAGTTTGAAGTATATTGGTTCTGGTGCTGCTCCTCTTGGGAAAGAGTTGATGGAAGAGTGTGCTAAGCGTTTTCCTCATGCTACTGTTTCTCAGGGCTATGGTATGACTGAAACGTGTGGGATTGTTTCTGTGGAGAATACTAGAATGGGGATTCGGCATACTGGCTCAGCTGGAATGCTTGTTGCGGGAGTGGAAGCCCAAATTGTCAGTGTGGATACACTGAAGCCACTCCCTCCTGGACAGCTCGGGGAGATATGGGTGCGGGGTCCTAATATGATGCCAGGTTATTACAACAATCCACAGGCCTCAAGATTGACTATAGATAAAAAAGGGTGGGTACATACGGGAGATCTTGGATATTTTGATGAGGATGGAAATCTTTTTGTCGTTGACCGTATCAAAGAACTGATCAAGTATAAAGGGTTCCAGGTTGCACCAGCAGAACTTGAAGGTCTTCTTGTTTCTCATCCTGAAATACTTGATGCTGTTGTCATTCCATTTCCTGATGCCGAAGCTGGTGAGGTTCCGGTTGCCTATGTTGTGCGATCACCCAATAGCTCACTAACCGAGGAAGATATCCAAAAGTTTATTGCTGATCAGGTAGCACCTTTCAAAAGACTGCGAAGGGTGACATTTATCAACACTGTTCCAAAAACAGCATCAGGAAAAATTCTGAGAAGAGAGCTTATTGACAAAGCACGATCCAAAATATAA 1620 0.4309 MQKSGYGSDGIYRSLRPSLILPKNPNLSLVTHLFNKVTSSPNKTALIDADSSQTLTFAQLKSLTIKLAHSLIKIGLTKNDVVLFLAPNSYLYPVFFLAVASIGAVASTVNPQYTTVEVSKQAKDSNPKLIITVAELWEKVNHLNIPAVFLNSSGVATPDTVTSFESFVKLGESATEFPKIDVKQTDTAALLYSSGTTGVSKGVILTHQNFIASAAMISMDDELNGEINDVYLVVLPMFHVFGLAVITYSQLQRGNAIVSLKRFEFEVVLKTIEKFRVTRLWIVPPIVLALAKHGLVDKYDLSSLKYIGSGAAPLGKELMEECAKRFPHATVSQGYGMTETCGIVSVENTRMGIRHTGSAGMLVAGVEAQIVSVDTLKPLPPGQLGEIWVRGPNMMPGYYNNPQASRLTIDKKGWVHTGDLGYFDEDGNLFVVDRIKELIKYKGFQVAPAELEGLLVSHPEILDAVVIPFPDAEAGEVPVAYVVRSPNSSLTEEDIQKFIADQVAPFKRLRRVTFINTVPKTASGKILRRELIDKARSKI* 540
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr2g3282 539 Pfam AMP-binding enzyme 36 441 IPR000873 -
Mtr2g3282 539 ProSitePatterns Putative AMP-binding domain signature. 190 201 IPR020845 -
Mtr2g3282 539 Pfam AMP-binding enzyme C-terminal domain 450 525 IPR025110 -
Mtr2g3282 539 CDD 4CL 21 531 - -
Mtr2g3282 539 PANTHER 4-COUMARATE:COA LIGASE-LIKE PROTEIN 4 538 - -
Mtr2g3282 539 Gene3D - 437 538 IPR045851 -
Mtr2g3282 539 Gene3D - 10 436 IPR042099 -
Mtr2g3282 539 PANTHER LONG-CHAIN-FATTY-ACID--COA LIGASE 4 538 - -
Mtr2g3282 539 SUPERFAMILY Acetyl-CoA synthetase-like 23 537 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr2g3282 Mtr-Chr2 46911283 46916004 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr2g3282 1 539 Monolignol Biosynthesis Gene Families AT4G05160 67.279 0.0 773
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr2g3282 K01904 - gmx:100797843 863.603
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr2g3282 2 46911283 46916004 Mtr2g3282 2 46911283 46916004 ECH
Mtr2g3282 2 46911283 46916004 Mtr4g1685 4 29336138 29339261 PCT