Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr2g3278 ATGGCCGTGTTCAGTGTGAGAAGCATCAACAAAAAGAATGGTGGAGGTGGCATTGTGAAGCTCATTGAGAAGCTACAGAAGAAAATAGTAATAGGGAGAAACAAATCAACATCAACCTATGTGCCTGAGGATGTAAAGGAAGGACATTTTGCTGTGATTGCTAAGGGTAGGAAGGAAGAAGAAGCAAAGAGATTTGTGTTACCATTAAGTTGTTTAACTAATCCAACATTTGTGAGGCTATTAGAGAAAACAGAAGAAGAATATGGTTTTGATCATGAAGGTGCACTAACCATTCCTTGCAAGCCAAGTGAACTTCACAAGATGTTGCAACAGCAATGGCAAAAACAAGAGGGAGGTGCTGAAATTAACTGCTACAACATGCAATTCCTCCAATAA 396 0.3939 MAVFSVRSINKKNGGGGIVKLIEKLQKKIVIGRNKSTSTYVPEDVKEGHFAVIAKGRKEEEAKRFVLPLSCLTNPTFVRLLEKTEEEYGFDHEGALTIPCKPSELHKMLQQQWQKQEGGAEINCYNMQFLQ* 132
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr2g3278 131 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 23 117 IPR003676 GO:0009733
Mtr2g3278 131 Pfam Auxin responsive protein 33 109 IPR003676 GO:0009733
Mtr2g3278 131 PANTHER AUXIN-RESPONSIVE PROTEIN SAUR32-LIKE 23 117 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr2g3278 Mtr-Chr2 46875473 46876114 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr2g3278 42 121 Calmodulin-binding Proteins AT3G43120 42.683 5.83e-14 63.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr2g3278 - K14488 gmx:100794278 140.584
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr2g3278 2 46875473 46876114 Mtr2g3278 2 46875473 46876114 ECH
Mtr2g3278 2 46875473 46876114 Mtr4g1690 4 29400496 29401325 PCT