Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr2g3262 ATGTTACGACGTGACCAGGATCCATTAAAGTGGGATGAGGCGGCGGAGGCGTTGAAGGGAAGCCATTTTGAGGAAGTGAAGAGGATGGTGGAGGATTACAGGAAGGAGGTGGTAAGGGTGGGAGGAGAGACACTGAGGGTGGGGGAGGTAGTGGCGGTCGCAGAGAGGTTGGCGGCCGTAGAGCTGAATGAGCAGGCAAGGGTTAGAGTTAAGGAGAGTAGTGAGTGGGTGATGGAGAGTATCAATAAAGGTACTGATTTTTATGGTGTCACTACTGGCTTTGGTTCAACATCCCATAGAAGAACTAACCAAGGTCATGCACTTCAAACTGAGCTCATTAGGTTTTTGAATGCTGGAATTTTTGGTAATGGAACAGAACAATGCCATACATTGCCACAAAATGCAACAAGAGCTGCAATGTTAGTAAGAATCAACACACTCCTTCAAGGCTACTCAGGAATCAGATATGAAATGCTAGAAGCCATTACAAAACTTCTCAACCACAACATTACACCATGTTTACCTTTGCGCGGATCAATTTCCGCCTCAGGTGACTTGATTCCATTTTCTTACATAGCTTCACTTTTAACTGGCAGGCCTAATTCAAAAGCTATTAATGGATCCAATGGTGAAACCCTAAATGCTGCAGAAGCTTTTAATTTAGCTGATATAGGTGAAGAATTCTTCAAGTTGCAACCTAAAGAAGGTCTTGCACTTGTTAATGGAACTGGTGTTGGTGCTGGTTTAGCTTCTATAGTTCTATTTGATGCTAATATCTTAACTGTTTTATCTGAAATTATGTCAGCGATTTTCGCTGAAGTTATGCAAGGAAAGCCAGAGTTTACAGATCATTTAACACATAAATTGAAACATCATCCTGGTCAAATTGAAGCTGCAGCCTTGATGGAACATATTTTGCATAAAAGTGCCTGTGTTCATGCCGCAACGAAATCGCATGAGATAGATTTTCATAGAAAGCCTAAACAAGATAGATATGCACTTAGGACTTCACCGCAATGGTTAGGTCCACAAATTGAAGTTATTAGGTATTCAACAAAATCAATTGAGAGAGAGATTAATTCTGTGAATGATAATCCTTTGATTGATGTGAAAAGGAACAAAGCTTTGCATGGTGGAAACTTTCAAGGTACACCAATTGGTGTTTCTATGGATAATACAAGATTAGCTTTGGCTGCTATTGGAAAGTTACTTTTTGCTCAAATGTCTGAGTTGGTTAATGATTTTTACAACAATGGTTTGCCTTCAAATCTCTCGGGTGGTAAATGTTTAAGCTTGGATTATGGACTTAAAGGCGGTGAGATAGCGATGGCTGCATATTGTTCTGAGCTTCAGTTTTTAGCTAACCCTGTTACTAATCATGTCCAAAGCGCTGAACAGCATAATCAAGATGTTAATTCACTTGGATTAATCTCTGCAAGGAAAACAGCAGAAGCTGTTGAGATATTAAAGCTTATGTGTTCAACTTACTTGATTGCTTTATGTCAAGCAATAGATTTGAGGTATTTGGAGGAGAATCTAAAGATCACAGTTAAGAAAAGACTGAGTCAAGTGGCTAGAAAAATCTTAAATGTTGGAGTCAATGGTGAGATTCATCATTATATGTCTTGTGAGCAAGATTTGCTTAAAGTGGTTGATTGTGAATATGTTTTTACATATATTGATGACCCTTGTATGGACACATACCCACTTATGCAAAAACTAAGGCAAGTGCTTGTGGAACATGCATTGAGGAGTAGTAATAATGGTTTGAAAAATATAAATGCTTCTATGTTCCTTAAGATAGGTGCATTTGAGGAGGAACTAAAAAGGGTCTTGCCAAAAGATGTTGAATTTACAAGAAGTGCTTTTGAAAAAGGGATTTTAGCAAGTCCTAACAAAATCAAGGAATGCAGGTCTTATCCATTGTATAAGTTTGTTAGAGAGGAATTGGGGATTGAATTTTTAACTGGTGAGAAAATTAAATCACCAGGAGAAGATTTTGATAAAGTTTTGAATGCAATTACTCTTGGAAAGATAATTGATCCAATGTTTGAATGCCTTAAGGATTGGGATGGTACTCCCCTTCCTATAGAATTTCATTAG 2103 0.3833 MLRRDQDPLKWDEAAEALKGSHFEEVKRMVEDYRKEVVRVGGETLRVGEVVAVAERLAAVELNEQARVRVKESSEWVMESINKGTDFYGVTTGFGSTSHRRTNQGHALQTELIRFLNAGIFGNGTEQCHTLPQNATRAAMLVRINTLLQGYSGIRYEMLEAITKLLNHNITPCLPLRGSISASGDLIPFSYIASLLTGRPNSKAINGSNGETLNAAEAFNLADIGEEFFKLQPKEGLALVNGTGVGAGLASIVLFDANILTVLSEIMSAIFAEVMQGKPEFTDHLTHKLKHHPGQIEAAALMEHILHKSACVHAATKSHEIDFHRKPKQDRYALRTSPQWLGPQIEVIRYSTKSIEREINSVNDNPLIDVKRNKALHGGNFQGTPIGVSMDNTRLALAAIGKLLFAQMSELVNDFYNNGLPSNLSGGKCLSLDYGLKGGEIAMAAYCSELQFLANPVTNHVQSAEQHNQDVNSLGLISARKTAEAVEILKLMCSTYLIALCQAIDLRYLEENLKITVKKRLSQVARKILNVGVNGEIHHYMSCEQDLLKVVDCEYVFTYIDDPCMDTYPLMQKLRQVLVEHALRSSNNGLKNINASMFLKIGAFEEELKRVLPKDVEFTRSAFEKGILASPNKIKECRSYPLYKFVREELGIEFLTGEKIKSPGEDFDKVLNAITLGKIIDPMFECLKDWDGTPLPIEFH* 701
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr2g3262 700 Gene3D Fumarase/aspartase (Central domain) 245 692 - -
Mtr2g3262 700 SUPERFAMILY L-aspartase-like 7 697 IPR008948 GO:0003824
Mtr2g3262 700 PANTHER HISTIDINE AMMONIA-LYASE 6 697 IPR001106 -
Mtr2g3262 700 CDD PAL-HAL 43 507 IPR001106 -
Mtr2g3262 700 TIGRFAM phe_am_lyase: phenylalanine ammonia-lyase 7 688 IPR005922 GO:0005737|GO:0006559|GO:0016841
Mtr2g3262 700 Gene3D - 2 243 IPR024083 -
Mtr2g3262 700 Pfam Aromatic amino acid lyase 45 510 IPR001106 -
Mtr2g3262 700 PANTHER AMMONIA-LYASE, PUTATIVE-RELATED 6 697 - -
Mtr2g3262 700 Gene3D - 510 632 IPR023144 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr2g3262 Mtr-Chr2 46653799 46656389 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr2g3262 1 697 Monolignol Biosynthesis Gene Families AT2G37040 72.246 0.0 1052
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr2g3262 K10775 - cit:102619342 1058.51