Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr2g3260 ATGAAGCATCAACTCAAAGTTTCTGTTGCTCTTGTTATTAGCTTGCTATGGTTTCAGCACTCATTTTGCGCAAAGGAACCATCTGATAGTGGTCGAAACAAGTGGAAATGTAAATGTTCTTTACGAGCGAATCAGAGATACTCTATCTCTAATTGTTCCAAGTCATGTGATTGCCATTCAGAGAGTGCATCCATATGGACATGTATATGTGATTCAAATGGATTTCCTAAAGTGGCAGCAGGAAGCCATAATCCTAATTGCTTTATTGCCTGCAACTGTATCTGGGGAACTGCTAAGATGACACTAGGTTCAAAGTCACACATTTCGAGCAAAATTGTAATTATCATTCTAATAATGTGTGTTACATGCACAATCATTGCATTTCTCGCCTTTGTTGTATGTTATGTTCGCCGAAGGGAAATACATCATCCTATTCAATCACCAATGGTTTCGTCATCAGATAAGGAAACAAGTTATAGTAGTACCAGTAACTTCATTAGTCAAAGGACTTCTTTTGTTCCGGAAACAAAAAGCGTTATAAATTCTCCTATTAGTCATATTACAAGATGCCTTCAAAAAGCCTCTATCTTGTTTGGGAATCAAAGAGAAATGTTTCATGGAAATATTATTCAATTCTCATTTGCTGAACTGGAAAATGCCACTGAAAACTTTTCAGCTTCAAACCTCATTGGACTAGGTGGAAGTAGTTATGTTTACCGTGGTCAACTGAAAAATGGTAGTAATGTGGCTGTCAAGCGACTTAAAGATCAAGGAGAGCCTAAAGCAGACACTGAATTTTTCACAGAGATTGAACTATTGTCTAGACTTCATCACTGTCATCTGGTGCCATTGATTGGATACTGCTCAGAATTGAAAGGAAAAAATGTTCAGAGGTTACTTGTGTTTGACTACATGAGTAACGGAAATTTGAGGGACCGTTTAGATGGAGTTTTTGGAAAAAATATGGATTGGTCTACTCGTGTTACAATTGCATTAGGAGCTGCAAGGGGCTTGGAGTATCTTCATGAAGCAGCTGCGCCAAGAATTCTCCACAGAGATGTCAAATCAACAAACATTCTTCTTGATAAAAATTGGCAAGCAAAAATAACTGATCTTGGTATGGCTAAAGACTTGAGATCTGATAGCCTCCCAAGTTGTTCATATTCTTCACAAAGAATGAAGGGGACATTTGGCTATTTTGCACCTGAGTATGCAATTGTTGGGAGATCCTCTATTGAGTCAGATGTCTTCAGTTTCGGCGTGGTTCTTCTTGAACTTATCAGTGGTCGCCAACCAATCCTTAAATCTGCAGGCAAAGAAGAAAGCCTTGTTGCTGCTCCTCGCTTACAGGATAGTAGGCGAGTATTGACAGAGTTGGCTGATCCACAATTGAAAGGAAACTTCCCAGAAGATGAGGTGCATATAATGGCAAACCTAGCAAAGGAATGCTTATTGTTGGATCCTGATAATAGACCAACTATGAGTGAAGTTGTTTTAATTCTTTCAAGTATTTCTCGAACCAAATCTAGAAGGAGAAGATACGTTCAATTGTGCCTTTTTCAGGACAGAGATGATGATGCAGAACAGCAAAGACAATCTTCATTGAGTAGATTTCCACCTCATAATTCATTGCCGCCTTGTACTGACTATGATCTTCGTGTTGGAAACGAAGATAAAGATGTAGACACAATTTCAACCGAGTATATGAAAAGTTTGATCCTCTTGACTTCAAAAGGTGAGAAGTGGCATGCATCCGAAGAGGAAATGGTAGACCTATCCGAGCCTCGGTTGGAATCCTTTTGCATGGAAAACATCAGTTTCCCTTGA 1827 0.3897 MKHQLKVSVALVISLLWFQHSFCAKEPSDSGRNKWKCKCSLRANQRYSISNCSKSCDCHSESASIWTCICDSNGFPKVAAGSHNPNCFIACNCIWGTAKMTLGSKSHISSKIVIIILIMCVTCTIIAFLAFVVCYVRRREIHHPIQSPMVSSSDKETSYSSTSNFISQRTSFVPETKSVINSPISHITRCLQKASILFGNQREMFHGNIIQFSFAELENATENFSASNLIGLGGSSYVYRGQLKNGSNVAVKRLKDQGEPKADTEFFTEIELLSRLHHCHLVPLIGYCSELKGKNVQRLLVFDYMSNGNLRDRLDGVFGKNMDWSTRVTIALGAARGLEYLHEAAAPRILHRDVKSTNILLDKNWQAKITDLGMAKDLRSDSLPSCSYSSQRMKGTFGYFAPEYAIVGRSSIESDVFSFGVVLLELISGRQPILKSAGKEESLVAAPRLQDSRRVLTELADPQLKGNFPEDEVHIMANLAKECLLLDPDNRPTMSEVVLILSSISRTKSRRRRYVQLCLFQDRDDDAEQQRQSSLSRFPPHNSLPPCTDYDLRVGNEDKDVDTISTEYMKSLILLTSKGEKWHASEEEMVDLSEPRLESFCMENISFP* 609
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr2g3260 608 Gene3D Phosphorylase Kinase; domain 1 196 304 - -
Mtr2g3260 608 Gene3D Transferase(Phosphotransferase) domain 1 305 524 - -
Mtr2g3260 608 PANTHER OS01G0253100 PROTEIN 2 602 IPR045271 GO:0004714|GO:0006468
Mtr2g3260 608 SMART serkin_6 224 504 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr2g3260 608 Pfam Protein kinase domain 226 498 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr2g3260 608 PANTHER RECEPTOR-LIKE SERINE/THREONINE-KINASE NCRK PROTEIN 2 602 - -
Mtr2g3260 608 ProSitePatterns Protein kinases ATP-binding region signature. 230 252 IPR017441 GO:0005524
Mtr2g3260 608 SUPERFAMILY Protein kinase-like (PK-like) 205 501 IPR011009 -
Mtr2g3260 608 ProSitePatterns Serine/Threonine protein kinases active-site signature. 349 361 IPR008271 GO:0004672|GO:0006468
Mtr2g3260 608 ProSiteProfiles Protein kinase domain profile. 224 504 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr2g3260 608 MobiDBLite consensus disorder prediction 529 552 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr2g3260 Mtr-Chr2 46627072 46632996 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr2g3260 1 605 Receptor kinase-like Gene Family AT2G28250 48.856 0.0 521
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-XVI Mtr2g3260 Pkinase 1e-44 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr2g3260 - - gmx:100499641 868.226
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr2g3260 2 46627072 46632996 Mtr4g1715 4 29830845 29837508 PCT