Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr2g3259 ATGGGATTTGATAATCCAAGATCTGAAAGGTTTGAAGATGATCCTGAAATATCAAAAATTCCCACAACAAGTGGAGTTAAGGTGAAATACCACATTGATGGAACACAAATACCTGAACAAAGTTCGAAAAAGTCTCGAAAGAATGAAACAAGGAACAAGTTTTTGAAAACAAGAGTATTGTCAAGAGTATTCTCAGAAGACTATGAAAGAGTTAAAAAAAGAGTATTAGTATTAGATCCTAGGGGACAACTCATACATCGTTGGAACAAGATATTTTTAGTAGCATGTTTAGTTTCTTTGTTTGTGGATCCACTGTTCTTTTATTTGCCAGTGGTTAGAGAAGAAGTTTGCATTGATATTGGAAAAACTCTTGAAGTTATTCTCACAGTTGTTAGATCATTTGGAGATTTGTTTTACATAGTTCAGATTTGTATGAAGTTTCGTACAGCTTATGTTGCTCCTTCTTCCAAGGTTTTTGGTAGAGGAGAACTTGTTCTTACCTATTCTAAGATTGCTCTTAGGTACTTCAGCAAGGGTTTTTGGTTAGACTTTATTGCCGCATTGCCTCTTCCTCAGGTGTTGATTTGGATTATTATACCAACACTTAGGGGTTCAACAATGGCAAATACCAAAAATGTCCTTCGTTTTTTCATCATTTTTCAATATATTCCAAGGCTGTATTTGATTTTTCCACTTTCATCACAAATTGTAAAAGCTACAGGGGTTGTGACAGAAACAGCATGGGCAGGTGCTGCTTACAACCTCATGCTTTACATGTTGGCCAGCCATATTTTAGGAGCTTGCTGGTACCTTCTTTCAATCGAGCGTCAAGAAGCATGTTGGAAAAGTGTGTGCAATATGGAGAAATCAAATTGCCAATATGGATTCTTCAATTGTCACAGTATTAAAGATGCTCCAAGAGTAGCTTGGTTTATAGCTAGTAATGTCACAAATTTATGTTCACCAAATGCCGGCTTTTATCCGTTTGGTATATATGCTGATGCCATGACTTCCAAAGTTACATCATCACCATTCTTCAATAAGTACTTCTATTGTCTCTGGTGGGGATTAAGAAACTTGAGTTCTTTGGGACAAGGTCTTCTTACTAGCACTTTTATCGGAGAAATAATGGTTGCTATTGTGGTTGCAACTCTTGGATTGGTACTTTTCGCATTGTTGATTGGTAATATGCAGACATACCTTCAATCGATAACTGTTCGCCTAGAAGAGTGGAGGGTGAAAAGAACTGATACAGAACAATGGATGCATCACAGGCAACTCCCTCCAGAACTAAGAGAGTCTATTCGTAAATATAATCAATATAAATGGGTGGCTACACGAGGAGTAGAAGAAGAAGATCTGCTCAAAGGACTTCCGCTGGATCTTAGGAGAGAAATCAAACGCCACCTTTGTCTTGAACTAGTTCGAGGAGTTCCCTTGTTTGATCAAATGGATGAAAGAATGCTAGACGCAATATGCGAAAGACTAAAGCCTGCATTATGCACCGAGGGAACTTATCTTGTCCGCGAAGGCGATCCAGTGAACGAAATGCTCTTCATAATTAGAGGCCATCTTGATTCTTACACAACAAATGGAGGCCGTGACGGATTCTTCAACTCATGTAGAATCGGTCCAGGCGATTTCTGTGGTGAAGAGCTCTTAACATGGGCCTTAGATCCAAGACCAAGTGTGATACTCCCTTCCTCAACAAGAACAGTTAAAGCTTTCTCAGAAGTAGAAGCTTTTGCACTCATAGCTGAAGATCTTAAGTTTGTTGCATCTCAATTTAGAAGACTACATAGTAAACAACTTAGGCATAAATTCAGATTTTATTCACACCAATGGAGAACTTGGGCTGCTTGTTTTATTCAAGCTGCATGGAGAAGGCACAAGAAAAGGAAAGAAGCTGCTGAATTGAGGGCTAAGGAGAATCTTGTGGCAGCTTCAGAGGCTGAAAATGAAATAGCAAAAAAATATGGTAAAGGTTTTGTTGTTTATGGAACAAGGGTGGCAAGGAGTACTAGGAAAGGTGTTAATATGCATTCTGGGACAAATTCTGGAGTAGTTAGCTCTTTGCAGAAACCAACAGAACCTGATTTTTCTGATGAATAA 2112 0.3849 MGFDNPRSERFEDDPEISKIPTTSGVKVKYHIDGTQIPEQSSKKSRKNETRNKFLKTRVLSRVFSEDYERVKKRVLVLDPRGQLIHRWNKIFLVACLVSLFVDPLFFYLPVVREEVCIDIGKTLEVILTVVRSFGDLFYIVQICMKFRTAYVAPSSKVFGRGELVLTYSKIALRYFSKGFWLDFIAALPLPQVLIWIIIPTLRGSTMANTKNVLRFFIIFQYIPRLYLIFPLSSQIVKATGVVTETAWAGAAYNLMLYMLASHILGACWYLLSIERQEACWKSVCNMEKSNCQYGFFNCHSIKDAPRVAWFIASNVTNLCSPNAGFYPFGIYADAMTSKVTSSPFFNKYFYCLWWGLRNLSSLGQGLLTSTFIGEIMVAIVVATLGLVLFALLIGNMQTYLQSITVRLEEWRVKRTDTEQWMHHRQLPPELRESIRKYNQYKWVATRGVEEEDLLKGLPLDLRREIKRHLCLELVRGVPLFDQMDERMLDAICERLKPALCTEGTYLVREGDPVNEMLFIIRGHLDSYTTNGGRDGFFNSCRIGPGDFCGEELLTWALDPRPSVILPSSTRTVKAFSEVEAFALIAEDLKFVASQFRRLHSKQLRHKFRFYSHQWRTWAACFIQAAWRRHKKRKEAAELRAKENLVAASEAENEIAKKYGKGFVVYGTRVARSTRKGVNMHSGTNSGVVSSLQKPTEPDFSDE* 704
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr2g3259 703 PANTHER - 11 702 - -
Mtr2g3259 703 SMART cnmp_10 480 611 IPR000595 -
Mtr2g3259 703 CDD CAP_ED 480 611 IPR000595 -
Mtr2g3259 703 MobiDBLite consensus disorder prediction 1 23 - -
Mtr2g3259 703 Gene3D - 91 406 - -
Mtr2g3259 703 Gene3D Helix hairpin bin 408 471 - -
Mtr2g3259 703 PANTHER CYCLIC NUCLEOTIDE-GATED ION CHANNEL 15-RELATED-RELATED 11 702 - -
Mtr2g3259 703 Coils Coil 634 654 - -
Mtr2g3259 703 MobiDBLite consensus disorder prediction 676 696 - -
Mtr2g3259 703 ProSiteProfiles cAMP/cGMP binding motif profile. 480 565 IPR000595 -
Mtr2g3259 703 PRINTS EAG/ELK/ERG potassium channel family signature 143 152 IPR003938 GO:0005249|GO:0006813|GO:0016020
Mtr2g3259 703 PRINTS EAG/ELK/ERG potassium channel family signature 260 270 IPR003938 GO:0005249|GO:0006813|GO:0016020
Mtr2g3259 703 PRINTS EAG/ELK/ERG potassium channel family signature 349 366 IPR003938 GO:0005249|GO:0006813|GO:0016020
Mtr2g3259 703 PRINTS EAG/ELK/ERG potassium channel family signature 393 402 IPR003938 GO:0005249|GO:0006813|GO:0016020
Mtr2g3259 703 PRINTS EAG/ELK/ERG potassium channel family signature 443 450 IPR003938 GO:0005249|GO:0006813|GO:0016020
Mtr2g3259 703 Gene3D Jelly Rolls 478 598 IPR014710 -
Mtr2g3259 703 SUPERFAMILY cAMP-binding domain-like 410 606 IPR018490 -
Mtr2g3259 703 MobiDBLite consensus disorder prediction 676 703 - -
Mtr2g3259 703 MobiDBLite consensus disorder prediction 1 17 - -
Mtr2g3259 703 Pfam Ion transport protein 88 407 IPR005821 GO:0005216|GO:0006811|GO:0016020|GO:0055085
Mtr2g3259 703 SUPERFAMILY Voltage-gated potassium channels 80 402 - -
Mtr2g3259 703 ProSiteProfiles IQ motif profile. 616 644 IPR000048 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr2g3259 Mtr-Chr2 46615833 46620262 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr2g3259 50 703 Ion Channels AT2G28260 74.006 0.0 1005
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr2g3259 K05391 - gmx:100786868 1140.56
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr2g3259 2 46615833 46620262 Mtr4g1717 4 29844841 29848192 PCT