Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr2g3258 ATGATACGAAAACAATCTTTATCATATAAAAACAATCTTTATGTTGCTCCTTCTTCCAAGGTTTTTGGTAGAGGAGAACTTGTTCTTACCTATTCTAAGATTGCTCTTAGGTACTTCAGCAAGGGTTTTTGGTTAGACTTTATTGCCGCATTGCCTCTTCCTCAGGTGTTGATTTGGATTATTATACCAACACTTAGGGGTTCAACAATGGCAAATACCAAAAATGTCCTTCGTTTTTTCATCATTTTTCAATATATTCCAAGGCTGTATTTGATTTTTCCACTTTCATCACAAATTGTAAAAGCTACAGGGGTTGTGACAGAAACAGCATGGGCAGGTGCTGCTTACAACCTCATGCTTTACATGTTGGCCAGCCATATTTTAGGAGCTTGCTGGTACCTTCTTTCAATCGAGCGTCAAGAAGCATGTTGGAAAAGTGTGTGCAATATGGAGAAATCAAATTGCCAATATGGATTCTTCAATTGTCACAGTATTAAAGATGCTCCAAGAGTAGCTTGGTTTATAGCTAGTAATGTCACAAATTTATGTTCACCAAATGCCGGCTTTTATCCGTTTGGTATATATGCTGATGCCATGACTTCCAAAGTTACATCATCACCTGTTGTGAATCCGTCTCGTGACGGATTCTTCAACTCATGTAGAATCGGTCCAGGCGATTTCTGTGGTGAAGAGCTCTTAACATGGGCCTTAGATCCAAGACCAAGTGTGATACTCCCTTCCTCAACAAGAACAGTTAAAGCTTTCTCAGAAGTAGAAGCTTTTGCACTCATAGCTGAAGATCTTAAGTTTGTTGCATCTCAATTTAGAAGACTACATAGTAAACAACTTAGGCATAAATTCAGATTTTATTCACACCAATGGAGAACTTGGGCTGCTTGTTTTATTCAAGCTGCATGGAGAAGGCACAAGAAAAGGAAAGAAGCTGCTGAATTGAGGGCTAAGGAGAGTCTTGTGGCAGCTTCAGAGGCTGAAAATGAAATAGCAAAAAAATATGGTAAAGGTTTTGTTGTTTATGGAACAAGGGTGGCAAGGAGTACTAGGAAAGGTGTTAATATGCATTCTGGGACAAATTCTGGAGTAGTTAGCTCTTTGCAGAAACCAACAGAACCTGATTTTTCTGATGAATAA 1149 0.3873 MIRKQSLSYKNNLYVAPSSKVFGRGELVLTYSKIALRYFSKGFWLDFIAALPLPQVLIWIIIPTLRGSTMANTKNVLRFFIIFQYIPRLYLIFPLSSQIVKATGVVTETAWAGAAYNLMLYMLASHILGACWYLLSIERQEACWKSVCNMEKSNCQYGFFNCHSIKDAPRVAWFIASNVTNLCSPNAGFYPFGIYADAMTSKVTSSPVVNPSRDGFFNSCRIGPGDFCGEELLTWALDPRPSVILPSSTRTVKAFSEVEAFALIAEDLKFVASQFRRLHSKQLRHKFRFYSHQWRTWAACFIQAAWRRHKKRKEAAELRAKESLVAASEAENEIAKKYGKGFVVYGTRVARSTRKGVNMHSGTNSGVVSSLQKPTEPDFSDE* 383
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr2g3258 382 Pfam Ion transport protein 26 165 IPR005821 GO:0005216|GO:0006811|GO:0016020|GO:0055085
Mtr2g3258 382 ProSiteProfiles IQ motif profile. 295 323 IPR000048 GO:0005515
Mtr2g3258 382 PANTHER - 209 381 - -
Mtr2g3258 382 PANTHER - 13 206 - -
Mtr2g3258 382 PANTHER CYCLIC NUCLEOTIDE-GATED ION CHANNEL 15-RELATED-RELATED 13 206 - -
Mtr2g3258 382 PANTHER CYCLIC NUCLEOTIDE-GATED ION CHANNEL 15-RELATED-RELATED 209 381 - -
Mtr2g3258 382 MobiDBLite consensus disorder prediction 355 382 - -
Mtr2g3258 382 Gene3D - 13 182 - -
Mtr2g3258 382 SUPERFAMILY Voltage-gated potassium channels 32 139 - -
Mtr2g3258 382 Coils Coil 313 333 - -
Mtr2g3258 382 MobiDBLite consensus disorder prediction 355 375 - -
Mtr2g3258 382 SUPERFAMILY cAMP-binding domain-like 215 297 IPR018490 -
Mtr2g3258 382 Gene3D Jelly Rolls 200 277 IPR014710 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr2g3258 Mtr-Chr2 46585703 46588489 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr2g3258 205 382 Ion Channels AT2G28260 66.854 1.58e-66 220
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr2g3258 K05391 - gmx:100786868 349.362