Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr2g3255 ATGCCTTGTTCATGCTTTAGGATCAGAAGTGTGAGGTGTGAGGGGCAAAATTGCCCTTACTACCCATACTTTCAAAATGATGAGGAATACCGCAACATACATACTGTATTTGGGTACAGAAATATCAGGAGAGTGTTTTTTTCAACTGATAATCATGATCGAAGACAAGAATTGGTTGATTCCCTAGCTTGGGAAGCAAGGAATAAAATGCTTTACCCTTTTACAGGGTCTTATGGAGTTCAGAGAGAGACTGAAGCCCTTGTAGCTACTCTGCAAAATCAGATTGCCACTCTGGAGGCAGATTTGGCCAATGCTCAAAATTCTGGTGCAGCTAATCTCAATCTCAATCTCAATCTCAATCTCAATCCTCATCAAATGCCACAGATACCTAATCCAAATCCTCCTCAAGTGCCGCAGATGCATAATTTTTTGGGTCTACCTAATGTCAATGCTGATGTCAATGATGTTGTGAATCAAAATCCTCCTCAAGTGCCATAG 498 0.4096 MPCSCFRIRSVRCEGQNCPYYPYFQNDEEYRNIHTVFGYRNIRRVFFSTDNHDRRQELVDSLAWEARNKMLYPFTGSYGVQRETEALVATLQNQIATLEADLANAQNSGAANLNLNLNLNLNPHQMPQIPNPNPPQVPQMHNFLGLPNVNADVNDVVNQNPPQVP* 166
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr2g3255 165 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 3 141 - -
Mtr2g3255 165 ProSiteProfiles LOB domain profile. 1 102 IPR004883 -
Mtr2g3255 165 Coils Coil 81 108 - -
Mtr2g3255 165 Pfam Lateral organ boundaries (LOB) domain 2 98 IPR004883 -
Mtr2g3255 165 PANTHER LOB DOMAIN-CONTAINING PROTEIN 27-RELATED 3 141 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr2g3255 2 113 AS2 family AT2G42430 28.696 2.41e-11 58.5
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Mtr2g3255 LOB 1.2e-13 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr2g3255 - K07045 mtr:MTR_2g094730 248.44