Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr2g3240 ATGGGCAAAGATGTTGAGGTTCAAGAACAAGGTGGTGAATTTTCAGCTAAGGATTACCAAGATCCACCACCAGCACCTTTGTTTGATTTAGATGAGTTAACAAAGTGGTCTTTGTACAGAGCTGTCATAGCTGAGTTTGTAGCAACTCTTCTCTTCCTATACATCACTGTTTTGACCATTATTGGTTATAGTAGACAAAGTGATACCACTATCAAAGGTAACACAGAATGTGATGGTGTTGGTGTTTTGGGAATTGCTTGGGCTTTTGGTGGTATGATCTTCATCCTTGTTTACTGCACCGCCGGTATCTCTGGAGGACACATTAATCCGGCTGTGACCTTTGGGCTATTTGTGGGACGCAAGGTGTCTTTAATAAGGGCATTCCTATACATAGTTGCACAATGTTTAGGAGCAATTTGTGGTGCTGGACTTGCAAAGGGGTTCCAAACATCATACTACAACAGGTACAAAGGAGGAGTTAACACTGTTTCTGATGGTTACAGCAAAGGCACTGCTTTAGGTGCTGAAATTATTGGTACCTTTGTTTTGGTCTACACTGTTTTCTCTGCTACTGATCCTAAGAGAAGTGCTAGGGATTCCCATGTTCCTGTATTGGCACCACTTCCCATTGGATTTGCTGTGTTCATGGTTCACTTGGCTACTATCCCCGTTACCGGTACGGGCATTAACCCCGCTAGGAGTTTCGGACCAGCCGTTATCTTCAATAACGAGAAAGCCTGGGATGATCAGTGGATTTATTGGGTTGGACCATTTATTGGTGCTGCTGTGGCTGCAATTTACCACCAATACATCCTTAGAGGATCAGCAATTAAAGCTCTTGGATCCTTCAGGAGCAATGCTTAA 864 0.434 MGKDVEVQEQGGEFSAKDYQDPPPAPLFDLDELTKWSLYRAVIAEFVATLLFLYITVLTIIGYSRQSDTTIKGNTECDGVGVLGIAWAFGGMIFILVYCTAGISGGHINPAVTFGLFVGRKVSLIRAFLYIVAQCLGAICGAGLAKGFQTSYYNRYKGGVNTVSDGYSKGTALGAEIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPVTGTGINPARSFGPAVIFNNEKAWDDQWIYWVGPFIGAAVAAIYHQYILRGSAIKALGSFRSNA* 288
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr2g3240 287 TIGRFAM MIP: MIP family channel proteins 44 267 IPR000425 GO:0015267|GO:0016020|GO:0055085
Mtr2g3240 287 MobiDBLite consensus disorder prediction 1 20 - -
Mtr2g3240 287 Pfam Major intrinsic protein 32 268 IPR000425 GO:0015267|GO:0016020|GO:0055085
Mtr2g3240 287 PRINTS Major intrinsic protein family signature 40 59 IPR000425 GO:0015267|GO:0016020|GO:0055085
Mtr2g3240 287 PRINTS Major intrinsic protein family signature 89 113 IPR000425 GO:0015267|GO:0016020|GO:0055085
Mtr2g3240 287 PRINTS Major intrinsic protein family signature 126 145 IPR000425 GO:0015267|GO:0016020|GO:0055085
Mtr2g3240 287 PRINTS Major intrinsic protein family signature 175 193 IPR000425 GO:0015267|GO:0016020|GO:0055085
Mtr2g3240 287 PRINTS Major intrinsic protein family signature 211 233 IPR000425 GO:0015267|GO:0016020|GO:0055085
Mtr2g3240 287 PRINTS Major intrinsic protein family signature 251 271 IPR000425 GO:0015267|GO:0016020|GO:0055085
Mtr2g3240 287 Gene3D Glycerol uptake facilitator protein. 25 287 IPR023271 -
Mtr2g3240 287 PANTHER AQUAPORIN PIP2-7 1 287 - -
Mtr2g3240 287 PANTHER AQUAPORIN OR AQUAGLYCEROPORIN RELATED 1 287 IPR034294 -
Mtr2g3240 287 ProSitePatterns MIP family signature. 107 115 IPR022357 -
Mtr2g3240 287 CDD MIP 40 271 IPR000425 GO:0015267|GO:0016020|GO:0055085
Mtr2g3240 287 SUPERFAMILY Aquaporin-like 32 272 IPR023271 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr2g3240 Mtr-Chr2 46312846 46315333 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr2g3240 1 285 Major Intrinsic Protein MIP AT5G60660 77.895 2.02e-167 464
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr2g3240 K09872 - gmx:732581 534.258
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr2g3240 2 46312846 46315333 Mtr4g1733 4 30018738 30020717 PCT