Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr2g3238 ATGCAACTGCTATGGTGGATAAGGCTGCTACTACTCATAATGATTCAATTGTTATTATACCTCAACATATCAACCTGCAAATTATCTTCTAAGGATTTGTTAAATTTCAAAGGATTACTTGAAGCTGGTCCACAACAACTTGGATGCGATATTGTGAAACATCCATGTCAAATGCAATGGCCTTGTCTTGACTGTTCTAAACAAAATGAACCAGGTAGGGTAAAAGAAAATATAGACAAGAACAATGACACTCCAATACTTGCAAAAGAAGCTCAAGTTAAAAAACCAGGAGGAGGAAGGGTTGCGGTCATAGCTGGTGGCGCTGGTGCTGCCTTAACCATCATTGTCATTGCGGTGATTATATGTATCTGCTTGAGAAGATGTAAAAGATTTAAAAAGCAACCATCTGATTCTGCTTCTTCTGTGCCATCTCAAGCTGTTGAGATGGGAAGAATCAACAACTCGCAGTATGTTAATGCTTTCTCTCCACATTATATGCAGAACACAAGGCTGTTAACAATTTTAGAGATAGAACAAGCTACAGGAAAATTTAATCAAAGTAACATTATAGGTGAAGGGAGATTTGGTTTTGTATACAAAGGTTTGCTTCAAGATGGATCTTTTGTCGCTATAAAAAGGCGCCTATTTGCTCTAACTCGAGATTTCATTCCTGAGGTCAAGCAGATAGCTCAAATCCACCACATTCATCTTGTGAAGCTTATTGGTTATTATGATGATAGCTATCAACAATTACTTGTGTATGAATATCTCCCTAATGGCAATGTAGGGAATCATCTATATGATAGTGAAGGTTTACCTATTGGAAAGTTAAACTTGCAGCGTAGGGTATCCATCGCCTTAGGCGCGTCCAAAGGACTTGAACATCTTCACAGTCTGGTCCCTCCTTTGCTTCACACAAATTTTAGTACAAGAAATGTTCTATTAGATGAAAATTATACAGCCAAAGTTTCTGATTATGGATTCTTCAAATTGCAAACAGAAATTGATCAGGCAGGCTCATCTTCAAATGTTGACTACTTTCATGATCCAGAGTTGAGCTTATCGCAAAACTACTCGGAGGAAAGTGATGTGTACAGTTTCGGAGTGTTTTTACTAGAGTTGATTAGTGGCTGTGAAGCATATAACAGAAATATGTCAAATCCATATGAAAGTCTTGTATTTGAGGCAAAATATAGCAGTGATTTGGAAAAATTTATTGACAAAGCATTAGGAGAGCAAGAAAAACATGGTGCTAGAAGAATAATGAAGTTGGCATTGCTATGTGTGGATGTGATTCTAAGAAGACCATCAATGGCACATATTGTGCAAGAATTGGAGAGGATACAAAGAGATATTGCTCCTTTGTATTCTGAAAACAATGAGGAGATTGGTGTGGTGAAACTTGGGAGTGAGCTATTCAAACAAGCCTCTTGA 1434 0.3752 MQLLWWIRLLLLIMIQLLLYLNISTCKLSSKDLLNFKGLLEAGPQQLGCDIVKHPCQMQWPCLDCSKQNEPGRVKENIDKNNDTPILAKEAQVKKPGGGRVAVIAGGAGAALTIIVIAVIICICLRRCKRFKKQPSDSASSVPSQAVEMGRINNSQYVNAFSPHYMQNTRLLTILEIEQATGKFNQSNIIGEGRFGFVYKGLLQDGSFVAIKRRLFALTRDFIPEVKQIAQIHHIHLVKLIGYYDDSYQQLLVYEYLPNGNVGNHLYDSEGLPIGKLNLQRRVSIALGASKGLEHLHSLVPPLLHTNFSTRNVLLDENYTAKVSDYGFFKLQTEIDQAGSSSNVDYFHDPELSLSQNYSEESDVYSFGVFLLELISGCEAYNRNMSNPYESLVFEAKYSSDLEKFIDKALGEQEKHGARRIMKLALLCVDVILRRPSMAHIVQELERIQRDIAPLYSENNEEIGVVKLGSELFKQAS* 478
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr2g3238 477 PANTHER PROTEIN KINASE APK1A, CHLOROPLASTIC-LIKE 66 472 - -
Mtr2g3238 477 PANTHER PROLINE-RICH RECEPTOR-LIKE PROTEIN KINASE PERK4 66 472 - -
Mtr2g3238 477 Gene3D Phosphorylase Kinase; domain 1 144 256 - -
Mtr2g3238 477 Gene3D Transferase(Phosphotransferase) domain 1 257 468 - -
Mtr2g3238 477 ProSiteProfiles Protein kinase domain profile. 184 433 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr2g3238 477 SUPERFAMILY Protein kinase-like (PK-like) 163 455 IPR011009 -
Mtr2g3238 477 Pfam Protein tyrosine and serine/threonine kinase 187 444 IPR001245 GO:0004672|GO:0006468
Mtr2g3238 477 ProSitePatterns Protein kinases ATP-binding region signature. 190 212 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr2g3238 Mtr-Chr2 46284280 46289894 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr2g3238 93 450 Receptor kinase-like Gene Family AT4G02010 33.422 4.22e-49 177
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-IXa Mtr2g3238 PK_Tyr_Ser-Thr 8.5e-33 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr2g3238 - - gmx:100780443 634.024