Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr2g3222 ATGGAGGGACAACAAAATGGATCAAAATCAAATTACACTTTTCCACCTGGTTTCAGATTCCATCCTTCTGATGAAGAACTCATAGTTCATTACTTGCAAAACAAAATCAAATCGCGTCCACTTCCAGCGTCGATTATAGCTGAAATTGATCTCTATAAGTATAATCCATGGGAGTTACCTAAGAAGTCTTTGTTTGGTGAGGAAGAATGGTATTTCTTTAGTCCGAGAGACCGAAAGTATCCAAATGGATTAAGGCCAAATAGAACAGCAGCTTCAGGATATTGGAAGGCAACTGGAACTGATAAGCCAATAATTTCTTCATGTGAATCAAAGCATATAGGAGTGAAGAAAGCTCTTGTGTTTTATTCAGGTAGACCTCCTAAGGGAGTTAAGACAGATTGGATCATGAACGAATATAGATTGGTTGACACAACGGCGAAATCGTTTAAACTCAAAGGTTCGATGCGGTTGGATGACTGGGTATTATGTCGGGTTCGAAATAAAGGCTATTCATTGAAGAATTTATCTGAAAATCAAGAGAATCCTAGTGAACCAACCATACCATTAAACTTACCAAGGGGTGAAGAACGCCCTACAAACGTGAACCTTCGATCTGACATTATCACAGATTATCAGTTCAAAGACTATCAGATTATAGCCTCTATTCTAGTTGGCGGAGTTATACCTCCAACTGAGAACATGTCGAGTTTGAGCGTTAATGGAAGCAAATTCAACAATCTAAACTCAGTTTCTGAAGAAGGTTTCAATAAAGCGAATTCTCAAACTACAAACTATTCTTTGGAATGTTACTTCAATCCACTGAAAAGAAAATCTAACGAGGATGATGATCAGTTTGAAAATCTCATTTCTTTTAACAGCAAGTTCAACTCTGAGAACAAATTATGCGAATCTCCTAGCATCGATTTTCAAAAGCTAAACAAATTTACCTTTACAGAAAGATATCAGCAATGA 972 0.3704 MEGQQNGSKSNYTFPPGFRFHPSDEELIVHYLQNKIKSRPLPASIIAEIDLYKYNPWELPKKSLFGEEEWYFFSPRDRKYPNGLRPNRTAASGYWKATGTDKPIISSCESKHIGVKKALVFYSGRPPKGVKTDWIMNEYRLVDTTAKSFKLKGSMRLDDWVLCRVRNKGYSLKNLSENQENPSEPTIPLNLPRGEERPTNVNLRSDIITDYQFKDYQIIASILVGGVIPPTENMSSLSVNGSKFNNLNSVSEEGFNKANSQTTNYSLECYFNPLKRKSNEDDDQFENLISFNSKFNSENKLCESPSIDFQKLNKFTFTERYQQ* 324
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr2g3222 323 Pfam No apical meristem (NAM) protein 15 141 IPR003441 GO:0003677|GO:0006355
Mtr2g3222 323 Gene3D NAC domain 23 171 IPR036093 GO:0003677|GO:0006355
Mtr2g3222 323 SUPERFAMILY NAC domain 10 168 IPR036093 GO:0003677|GO:0006355
Mtr2g3222 323 ProSiteProfiles NAC domain profile. 14 168 IPR003441 GO:0003677|GO:0006355
Mtr2g3222 323 PANTHER NAC TRANSCRIPTION FACTOR-LIKE PROTEIN 10 308 - -
Mtr2g3222 323 MobiDBLite consensus disorder prediction 175 196 - -
Mtr2g3222 323 PANTHER NAC TRANSCRIPTION FACTOR 56 10 308 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr2g3222 Mtr-Chr2 46118924 46120379 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr2g3222 10 179 NAC Transcription Factor Family AT1G69490 66.471 1.42e-81 246
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Mtr2g3222 NAM 4.5e-38 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr2g3222 - - gmx:100817193 484.567