Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr2g3221 ATGTCTGTCATCGACATTCTCTTCCGTGTCGACGACATATGCAAAAAATATGACAAATACGACATTGATAAACAACGTGAACTCAACGCCTATGGTGATGATGGATTCGCTCGTCTCTACGCAGCCGTTGATTCCACTATTCAACAAGCTCTCAATAAATCTGAGGCTGCTTCCAAGGAGACCAACAGGGCAGTTGCTGCGGCTTGGAATGCCGAGGTTCGTAGAGCCAAGGGGAGATTGATGGACGAAGTTCCCAAGCTTACGAAGCTGGTTAATAAGAAGGTTAAAGGCCTGTCAAGTGAAGACATAGCCATTCGAAACGATCTTGTTCTTGCATTGCCAGAGAGAATCCTATCAATACCAGATGGTATTACTTCTGCTGCTAGTCATACTGGAGGAACCTCATCTCATCCGCATATCAAGTTCGATTCACCAGAGGGACCTCTTGACAGTGACTATTTCAATCAAAGTGAAGAATCCAATCAGTTTCGAAATGAATATGAAATGCGCAAGATCAAACAGGATGAAGGGCTTGATATCATATCAGAAGGATTGGATACTTTGAAAAATCTAGCCCTTGATATGAATGAGGAAATAGAACGTCAAGTTCCTTTAATGGATGAAATGGACGCAAAGGCGGATAAGGCAATGAGTGATTTGAGAAACACTAACTTAAGGCTGAAGAAAACTATCACTGAGCTAAGGTCTAGTCGAAATTTCTGCATCGACATCATTCTATTATGTGTTCTTCTTGGAATCGTTATGTATTTATACAAGTAA 780 0.4141 MSVIDILFRVDDICKKYDKYDIDKQRELNAYGDDGFARLYAAVDSTIQQALNKSEAASKETNRAVAAAWNAEVRRAKGRLMDEVPKLTKLVNKKVKGLSSEDIAIRNDLVLALPERILSIPDGITSAASHTGGTSSHPHIKFDSPEGPLDSDYFNQSEESNQFRNEYEMRKIKQDEGLDIISEGLDTLKNLALDMNEEIERQVPLMDEMDAKADKAMSDLRNTNLRLKKTITELRSSRNFCIDIILLCVLLGIVMYLYK* 260
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr2g3221 259 CDD SNARE_Qc 173 229 - -
Mtr2g3221 259 Pfam SNARE domain 205 254 IPR000727 -
Mtr2g3221 259 PANTHER SYNTAXIN 1 258 IPR045242 -
Mtr2g3221 259 Gene3D - 168 229 - -
Mtr2g3221 259 ProSiteProfiles t-SNARE coiled-coil homology domain profile. 168 230 IPR000727 -
Mtr2g3221 259 SUPERFAMILY SNARE fusion complex 161 229 - -
Mtr2g3221 259 PANTHER SYNTAXIN-72 1 258 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr2g3221 Mtr-Chr2 46115574 46118218 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr2g3221 1 258 SNARE and Associated Proteins AT3G09740 64.639 3.63e-124 352
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr2g3221 K08506 - gmx:100777251 390.963