Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr2g3217 ATGGATGATTTGGTTTCAAGTTGTAAGGAAAAATTGCAATATTTTCGTGTAAAGGATCTCAAAGATGTGCTTACTCAGATAGGAATTTCGAAGCAGGGAAAGAAGCAGGATCTTATCGATAGGATATTATCTATCATCTCAGATGAACAAGTTGCTAAAGTACGGGCTAAGAAGAATGCTGTTGAAAAAGAACAAGTGGTAAAATTAGTGGAGGACACATATAGAAAACTGCAGGTATCTGGAGCCACTGATATAGCATCAAAGGGGCAGGTTGCTTCAGACAGCAGTAATGTGAAAATTAAAGGTGAAGTTGAGGATTCCGTTCAATCAGCTACAAAGGTTCGATGTCTCTGTGGAAGTTCATTGGAAACAGATCTATTGATCAAGTGTGAAGATAGAAAATGCCCTGTGTCGCAACATCTCAACTGCGTTATTATTCCGGATACACCCACTGAAGGACTCCCGCCAATCCCAGATACATTTTATTGTGAAATATGTCGTCTCAGTCGTGCAGACCCGTTCTCGGTTTCAATGATGCACCCTTTACATCCGGTGAAGTTGTCTACAACCCTTGTCCCAACTGAAGGATCCAACCCCATGCAGAGTGTTGAGAAAACATTTCAACTTGCAAGAGCACACAAGGACATAGTATTAAAATCAGAATTTGATATTCAGGCTTGGTGCATGCTTCTGAACGACAAAGTTCCATTCAGGATGCAATGGCCACAATATGCAGACCTAGTTGTAAATGGCTATTCTGTTCGTGCAATTAATAGACCCGGTTCACAATTGCTTGGGGCTAATGGTCGCGATGATGGCCCAATTATCACACCATATATAAAAGAAGGAGTTAACAAGATTTCTTTGACGGGGTGTGACACTCGCATTTTCTGTTTGGGGGTCCGCATTGTTAGAAGGCGCACTTTGCAACAGATCTTGAACATGATTCCAAAGGAGTCTGATGGTGAGCGTTTTGAAGTTGCTCTTGCTCGTGTCTGTTGTCGTGTTGGCGGTGGAAATTCAGCTGATGATGCTGGTAGTGACAGTGATCTGGAAGTAGTTTCAGATACTTTTAGCATCAGCCTTCGTTGTCCAATGAGTGGTTCAAGAATGAAGATTGCAGGAAGATTCAAACCTTGTGTTCACATGGGTTGTTTTGATCTTGAAGTTTTTGTGGAAATGAATCAACGCTCAAGAAAGTGGCAATGCCCCATATGTCTCAAAAACTATGCACTGGAGAATATCATTATTGATCCTTATTTCAATCGCATCACTTCTATGATGAAAAACTGTGGGGAGGAGTTTACAGATGTGGAGGTGAAGCCTGATGGTTATTGGCGTGTCAAGGCTAAGAGTGAAAGTGAATGCCGTGAGTTGGGGAATCTTGCTAAATGGCACTGTCCTGACGGATCGCTCCCTGTTTCTACCAGTGGAGAAGACAAGAGAGTGGAAACTTTGAATGTCAAACAGGAAGGTGTTTCAGACAGTCCTAATGGCTTAAGACTTGGCATTAGGAAAAACTGTAATGGAGATTGGGAAGTCAGCAAACCCAAGGACACAAACATCTCTTCTGATAATAGGTTGAATGCTGATTTAGGAAATCATGAAGTTGTAGTTATTCAAATGAGCAGCAGTGGCTCTGAAAGTAGATTGGATGGTGATGATCCAAGCGTAAATCAGAGTGGTGGTGGGCATACAGATTATTCTCCTACTAATGGGATTGAGACGAATTCTGTGTGTCACACTAATGTTGATTCAACTTATGGATATACCATTCCTAACACTTCTGCTCCGATGGCTAATGCAGAAGTTATTGTTCTTAGCGATTCTGAAGATGATGAAATATTAATATCTCCTACAGTTGGTTACGGAAATAATCAAACTGGTGATGCAGTTGATGCTTACTCAGTGCCTCCGCCTGGAATTATGGATCCATATGCTGGAGATCACAGTATTGGTGGAAATCCATGCTTGGGAGTTTTTGATAATCCCAATGAAAGCATTTTTGGGATTCCCTCAGTCTGGCCACTGCATTCTGGAACTCAGGCAAGCTCGGGATTCCAACTATTCAGTTCTGATGTGGATGTGTCTGATGCATTGGCCCATGGTGATATTAATTGCTCCTCTTCACTGAATAGTTATACGTTGGCTCCTGACACTGCTCTGGGATCTAGTGCTCTAATACCAAATTCATCCACTGATCGGTCCGACACTGATTTAAATGGTGGTTTGGTTGACAATCCATTGGCATTTGGTGGACAGGATCCCTCACTTCAGATTTTTCTCCCTACAAGACCAGCAGAATCATCTGTGCAGCATGAATTAAGAAATCACACAGATGTGTCGAATGGTGTCTGCACAGAGGATTGGATCTCTCTTAGCCTTGGGGGTGGGGCTGGTGGCAGTATTGGTGATGCTTCAACAACAAATGGTTTGAACTCCAGACCGCAAATTCAATCCAGAGAAGATGCGCCAGATTCTTTAACAGATTCTTTAAATGAGGCTGATTTGTTACTTGCTGAGACTGCTTCTTTGCTTCGTAGTGTGGATGATGCTGAATCTGACAAAGCAAGTAGGAAAAGATCAGACGGCCCTTTCTCATTTCCCCGCCAAAAACGTTCAGTAAGGCCCCGCTTGAATCTTTCTATTGGTTCAGATTCAGAGTAG 2667 0.4248 MDDLVSSCKEKLQYFRVKDLKDVLTQIGISKQGKKQDLIDRILSIISDEQVAKVRAKKNAVEKEQVVKLVEDTYRKLQVSGATDIASKGQVASDSSNVKIKGEVEDSVQSATKVRCLCGSSLETDLLIKCEDRKCPVSQHLNCVIIPDTPTEGLPPIPDTFYCEICRLSRADPFSVSMMHPLHPVKLSTTLVPTEGSNPMQSVEKTFQLARAHKDIVLKSEFDIQAWCMLLNDKVPFRMQWPQYADLVVNGYSVRAINRPGSQLLGANGRDDGPIITPYIKEGVNKISLTGCDTRIFCLGVRIVRRRTLQQILNMIPKESDGERFEVALARVCCRVGGGNSADDAGSDSDLEVVSDTFSISLRCPMSGSRMKIAGRFKPCVHMGCFDLEVFVEMNQRSRKWQCPICLKNYALENIIIDPYFNRITSMMKNCGEEFTDVEVKPDGYWRVKAKSESECRELGNLAKWHCPDGSLPVSTSGEDKRVETLNVKQEGVSDSPNGLRLGIRKNCNGDWEVSKPKDTNISSDNRLNADLGNHEVVVIQMSSSGSESRLDGDDPSVNQSGGGHTDYSPTNGIETNSVCHTNVDSTYGYTIPNTSAPMANAEVIVLSDSEDDEILISPTVGYGNNQTGDAVDAYSVPPPGIMDPYAGDHSIGGNPCLGVFDNPNESIFGIPSVWPLHSGTQASSGFQLFSSDVDVSDALAHGDINCSSSLNSYTLAPDTALGSSALIPNSSTDRSDTDLNGGLVDNPLAFGGQDPSLQIFLPTRPAESSVQHELRNHTDVSNGVCTEDWISLSLGGGAGGSIGDASTTNGLNSRPQIQSREDAPDSLTDSLNEADLLLAETASLLRSVDDAESDKASRKRSDGPFSFPRQKRSVRPRLNLSIGSDSE* 889
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr2g3217 888 SMART PHD_3 115 167 IPR001965 -
Mtr2g3217 888 ProSitePatterns Zinc finger PHD-type signature. 116 166 IPR019786 -
Mtr2g3217 888 ProSiteProfiles Zinc finger SP-RING-type profile. 347 430 IPR004181 GO:0008270
Mtr2g3217 888 MobiDBLite consensus disorder prediction 803 826 - -
Mtr2g3217 888 Pfam SAP domain 14 43 IPR003034 -
Mtr2g3217 888 SUPERFAMILY FYVE/PHD zinc finger 109 170 IPR011011 -
Mtr2g3217 888 PANTHER ZINC FINGER MIZ DOMAIN-CONTAINING PROTEIN 10 809 - -
Mtr2g3217 888 CDD PHD_Bye1p_SIZ1_like 115 166 - -
Mtr2g3217 888 MobiDBLite consensus disorder prediction 848 867 - -
Mtr2g3217 888 Pfam MIZ/SP-RING zinc finger 360 408 IPR004181 GO:0008270
Mtr2g3217 888 PANTHER E3 SUMO-PROTEIN LIGASE SIZ1 10 809 - -
Mtr2g3217 888 SMART sap_9 12 46 IPR003034 -
Mtr2g3217 888 MobiDBLite consensus disorder prediction 802 828 - -
Mtr2g3217 888 Gene3D SAP domain 1 65 IPR036361 -
Mtr2g3217 888 SUPERFAMILY SAP domain 4 65 IPR036361 -
Mtr2g3217 888 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 104 172 IPR013083 -
Mtr2g3217 888 ProSiteProfiles SAP motif profile. 12 46 IPR003034 -
Mtr2g3217 888 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 338 448 IPR013083 -
Mtr2g3217 888 MobiDBLite consensus disorder prediction 848 888 - -
Mtr2g3217 888 MobiDBLite consensus disorder prediction 543 574 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr2g3217 Mtr-Chr2 46075125 46085389 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr2g3217 - - gmx:100793735 1251.11
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr2g3217 2 46075125 46085389 Mtr4g1764 4 30467444 30477716 PCT