Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr2g3205 ATGGAGAATGACACAAACACTCAAATTTCCTCCCTTCCATTTTCTCAATCTCCAACATCTTCACAACCACCTATGGCTCCTCAAGTAGTCATGAGTCCTTGTGCTGCTTGCAAGATTTTAAGAAGAAGATGTGCTGAGAAATGTGTTTTGGCACCTTATTTCCCTCCCACGGAACCTTCCAAATTTACCACTGCTCACCGTGTATTTGGTGCTAGCAACATCATCAAGTTCTTACAGGAACTTCCTGAGTCTCAAAGAGCTGATGCAGTTAGTAGCATGGTTTATGAAGCCAGTGCAAGGATAAGAGACCCTGTTTATGGATGTGCAGGTGCAATTTGTCACCTCCAAAAGGAAGTCAATGAGCTTCAAGCACAACTAGCTAAGTCACAAGCTGAGCTTATTAACATGCAATTACAACAATCCAATCTCCTAGCTTTGATTTGCATGGAAATGAAAGAAACTCCAAATGAATCTCCACAACAATCAATGGACAACTTCATTTCAAGTCCTGCCTATAGCAGTGATTATCAAAATAATCTCAACTTCTTTGAGGACAACACTAGCCAAAATTCATTGTGGGAGCCTCTTTGGACATGA 597 0.4104 MENDTNTQISSLPFSQSPTSSQPPMAPQVVMSPCAACKILRRRCAEKCVLAPYFPPTEPSKFTTAHRVFGASNIIKFLQELPESQRADAVSSMVYEASARIRDPVYGCAGAICHLQKEVNELQAQLAKSQAELINMQLQQSNLLALICMEMKETPNESPQQSMDNFISSPAYSSDYQNNLNFFEDNTSQNSLWEPLWT* 199
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr2g3205 198 PANTHER LOB DOMAIN-CONTAINING PROTEIN 1 10 195 - -
Mtr2g3205 198 MobiDBLite consensus disorder prediction 1 25 - -
Mtr2g3205 198 ProSiteProfiles LOB domain profile. 32 133 IPR004883 -
Mtr2g3205 198 Pfam Lateral organ boundaries (LOB) domain 33 130 IPR004883 -
Mtr2g3205 198 Coils Coil 119 139 - -
Mtr2g3205 198 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 10 195 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr2g3205 Mtr-Chr2 45897082 45900090 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr2g3205 29 198 AS2 family AT2G28500 68.108 1.53e-81 240
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Mtr2g3205 LOB 3.6e-41 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr2g3205 - - gmx:100819336 321.242
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr2g3205 2 45897082 45900090 Mtr4g1775 4 30635679 30637996 PCT