Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr2g3200 ATGGAAAAGTTCATCGACAACTTACCGCCGATGGATCTGATGCGATCCGAGAAGATGACGTTTGTTCAACTCATCATCCCTGCCGAATCCGCTCACCGTGCCGTTTCCTATTTAGGTGAACTCGGTCTTCTTCAATTCCGTGATTTAAATGCTGACAAAAGTCCTTTCCAGAGAACATTTGTTAATCAGGTAAAGCGATGTGCGGAGATGTCAAGAAAGCTACGATTTTTCAAGGATCAAGTCAATAAAGCTGGTCTAATGTCCTCTTCTCGTACTCTATTGCAACCGGACATTGACTTGGAGGATTTAGAGGTACATCTTGCTGAGCATGAACATGAGCTAATTGAAATGAACTCCAATAGTGACAAACTTCGGCAATCATATAATGAACTTCTGGAATTCAAGATTGTATTACAAAAGGCATGTGGTTTTCTTATTTCAAGTCATGGCCGTGCTGTTTCAGGCGAGATCGAACTACAGGATAATGTATACTCAAATGATGATTATATCGAGACAGCATCTTTACTTGAACAGGAAATGAGACCCCAACCATCAACATCTGGTTTAAGATTTATCAGTGGGATAATTTGTAAATCCAAGGCTCTTAGGTTTGAAAGGATGTTATTTCGTGCTACAAGAGGCAATATGTTTTTCAATCAGGCACCAGCTGGAGAGCAAATCATGGATCCTATTACAACCGAGATGATTGAGAAAACAGTATTCGTTGTGTTTTTCTCTGGGGAACAAGCAAGAACAAAGATTCTGAAAATTTGTGAGGCATTTGGTGCGAATTGTTATCCTGTTCCTGAAGATATAAGTAAGCACGGGCAAATAACTAGAGAGGTTACGTCACGTCTTACTGACCTAGAGGCAACTTTGGATGCTGGGATCAGGCACCGGAACAAGGCACTATCTTCCATTGCAGACCATCTGGCAAAATGGATGGACCTGGTAAGAAGAGAGAAGGCTGTGTATGATACGTTGAACATGTTAAATTTTGATGTCACAAAAAAATGTCTCGTTGGAGAGGGATGGTGTCCTATGATTGCAAAAACACAGATGCAGGAGGCATTGCAACGGGCAACTTTTGATAGCAATTCTCAAGTTGGCATAATCTTCCATCAAATGGATGCAGTGGAATCCCCACCTACATATTTCAAGACCAACACTTTCACAAATCCGTATCAGGAAATTGTTGATGCATATGGTGTTGCAAGATACCAAGAAGCAAATCCTGCAGTTTACACAACTGTTGTATTCCCCTTCCTATTTGCTATGATGTTTGGGGACTGGGGTCATGGAATTTGCCTGTTGCTGGGAGCATTAATTCTTATAGCACATGAAAACAAGCTCAGTACCCAGAAGCTTGGAAGCTTCATGGAGATGCTATTTGGCGGGCGCTATGTGATTCTTTTGATGTCACTATTTTCAATCTATTGCGGGTTAATCTACAATGAGTTCTTTTCTGTTCCTTTTCACATATTTGGTCCATCAGCGTTTCGATGTCGTGATACTTCATGCAGCGATGCACATACTATTGGCTTAGTCAAATACCGTGATCCATACCCATTTGGTGTGGATCCTAGCTGGCGTGGAAGTCGTTCAGAATTGGCTTTTCTGAACTCTATGAAGATGAAGATGTCCATTCTGTTTGGTGTGGCACATATGAACTTGGGAATTATATTAAGTTATTTCAATGCTCGTTTCTTTGGTAGCTCACTGGATATAAGGTACCAATTTGTGCCACAGATGATCTTCCTTAACAGTCTGTTTGGATATCTTTCCCTTCTCATTATTATTAAGTGGTGTACTGGCTCTCAAGCAGACCTTTATCATGTGATGATATATATGTTTTTAAGCCCTACAGACGAACTTGGTGAGAATCAGTTGTTCTGGGGCCAAAGACCACTTCAAATTGTGTTATTGCTTTTGGCTATAATTGCAGTTCCATGGATGCTCTTTCCAAAGCCTTTTATACTAAAGAAGCTTCATACTGAGCGATTTCAAGGTCGTAGTTATGGTATTTTGAATACTTCTGAAATGGATCTTGAGGTCGAGCCAGATTCTGCCAGGGAACATCATGAAGACTTCAATTTTAGTGAGATATTTGTTCACCAAATGATTCACTCCATCGAGTTTGTTTTAGGTTCAGTTTCAAATACGGCATCATATCTTCGACTTTGGGCATTAAGTTTGGCTCACTCGGAACTTTCTACTGTTTTCTACGAGAAAGTGTTGCTTCTTGCTTGGGGGTATGACAATCTCATCATTCGGTTAGTGGGGCTAACTGTTTTTGCCTTTGCAACTGCCTTTATATTACTTATGATGGAGAGTCTCAGTGCTTTTCTTCATGCCCTACGGCTTCACTGGGTAGAATTTCAAAATAAATTCTACCACGGTGATGGCTACAAGTTCAAGCCTTTTTCATTTGCTGCTTTAACAGAGGACGACGATTGA 2457 0.4066 MEKFIDNLPPMDLMRSEKMTFVQLIIPAESAHRAVSYLGELGLLQFRDLNADKSPFQRTFVNQVKRCAEMSRKLRFFKDQVNKAGLMSSSRTLLQPDIDLEDLEVHLAEHEHELIEMNSNSDKLRQSYNELLEFKIVLQKACGFLISSHGRAVSGEIELQDNVYSNDDYIETASLLEQEMRPQPSTSGLRFISGIICKSKALRFERMLFRATRGNMFFNQAPAGEQIMDPITTEMIEKTVFVVFFSGEQARTKILKICEAFGANCYPVPEDISKHGQITREVTSRLTDLEATLDAGIRHRNKALSSIADHLAKWMDLVRREKAVYDTLNMLNFDVTKKCLVGEGWCPMIAKTQMQEALQRATFDSNSQVGIIFHQMDAVESPPTYFKTNTFTNPYQEIVDAYGVARYQEANPAVYTTVVFPFLFAMMFGDWGHGICLLLGALILIAHENKLSTQKLGSFMEMLFGGRYVILLMSLFSIYCGLIYNEFFSVPFHIFGPSAFRCRDTSCSDAHTIGLVKYRDPYPFGVDPSWRGSRSELAFLNSMKMKMSILFGVAHMNLGIILSYFNARFFGSSLDIRYQFVPQMIFLNSLFGYLSLLIIIKWCTGSQADLYHVMIYMFLSPTDELGENQLFWGQRPLQIVLLLLAIIAVPWMLFPKPFILKKLHTERFQGRSYGILNTSEMDLEVEPDSAREHHEDFNFSEIFVHQMIHSIEFVLGSVSNTASYLRLWALSLAHSELSTVFYEKVLLLAWGYDNLIIRLVGLTVFAFATAFILLMMESLSAFLHALRLHWVEFQNKFYHGDGYKFKPFSFAALTEDDD* 819
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr2g3200 818 PIRSF ATP6V0A1 9 818 IPR026028 GO:0000220|GO:0046961
Mtr2g3200 818 Pfam V-type ATPase 116kDa subunit family 37 810 IPR002490 GO:0033179|GO:0046961|GO:1902600
Mtr2g3200 818 PANTHER VACUOLAR PROTON ATPASES 5 818 IPR002490 GO:0033179|GO:0046961|GO:1902600
Mtr2g3200 818 Coils Coil 100 127 - -
Mtr2g3200 818 PANTHER VACUOLAR PROTON ATPASE A1 5 818 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr2g3200 Mtr-Chr2 45819831 45832665 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr2g3200 1 811 Primary Pumps ATPases(2) AT2G28520 80.736 0.0 1358
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr2g3200 K02154 - gmx:100793301 1474.53
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr2g3200 2 45819831 45832665 Mtr4g1784 4 30752293 30764185 PCT