Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr2g3188 ATGAAACGAATTCACACCGCTAACCGATTTGAAAAGCACAAACCCCAAGAAAAACAAACAACACCACCACAAATCATGAAGTTCGTCACTGAAGCTCAACCATCTCCGTCTTCGTCCGCCGTACTCGAAGACGGTTGGTCCAACGATGCCACATTCACACTCATCGATGCATGGGGCAAACTTTCCAAAACGCTTAACCGAAAATATTTGCGTCAGTATCACTGGAAAGAGATAGCAAAAACCATCAATGACCATCACGGTTACTCTAGAAAAGAGCGACGCACTTACGTTCATTGCAAAAATCGATTCGAAGCGCTTAAGAAGAAGTACGCGATTGAAAAAGCTAGGGTTTCGGAAAACGAGCTTTACGATGATGAATGGTTGTTTTTCGAGAAACTTGATTCAGTACTTGGAGATGGTTTACCGGCCAAGAATGTCTCGCCTCCTGTTGAACCTACGGCGGATGTTCCGGCATGGGCGCTGGCACCGGTAGGTCGTAGATCAGGTGCTCAGAACACTGAGAAACAACCTGTGCAGGTGAGAATGTCGTCGGAGAGTGAGGAGGAGGGGTCACGTTTTCGCCGGAATGTAGCATCTCAGAAAAGTTTGGCGCCGATGACAATGACATCGTCTCCGGAGAGTGTGGAGGAGTCACGTTCTCTCCGGAGTTTATCTGCTCAGAAACGATTGTCGCCGGTGATAACAACATCGTCTCTGGAGAGCGCGGGGGACTTACGTTTTCGGAGAAATTTATCTGCTTTTGCTGCAGCTGCTGCTGCAGCAGCTGAAGTGGAGGTCGATAATTCGGATTCCTATAATTCGGATTCCGATGATTCAGATTTCAATTACGAAGGATATGATTCAGAGGTAAGCAATGAGAGCAAGAAAAGGAAGAGAGGAAGAAGGGATGTGGAATTAGGGCACAGAGAGGTTGCAGGAAGAAAGGATAGGGAATTAGGGTATAGAGAGGTTACAAATGCTATGGAGAAGCTTGGTGAAGTACATGAAAGAGTGGAATCGTCGAAGCAGCGAAAAAATGTGGATTTGGAGAAGCAGAAAATGCAGAAACAGAAGATGCAATTTTCAAAGGATTCTCAGAAGGTGCAATTTTCAGAAGGTTCTCAGAGAATGGAATTTTTAAAGGATGCTCAGACTCGGTGGATGCAATTTTTAGAGGATCAGACTCAGAGGATACAATCTTCAGAGGGTTCTCAGAGGATGCAATTTTCAAGGGATTCTCAGACTCAGAGGGTGCAATATCCAGAGGATTCTCAGAGGTGGAGGGTGCAATATCCAAAGGATTCTCCGAGAATGCAATTTTCAAAGGATTCTCAGACTCAGAGGATGCAATTTCCAGAGGATTCTCAGAGGTCGAGGGTGCAATATCCAAAGGATTCTCAGACTCAGAGGATGCAATTTCCAGAGGATTCTCAGAGGATGCAATTTTCAAAGGATTCTCAGAGAATGCAGCAGCAGAAAACCAACAACTCAAAACACATGGATGATGTATCAGCTCCTTCCCGAAGCAGGTTAGATTCTCAGTCTACCAAAAAGAAAGTTAGAGGTCCCACACTGATGAAGAAGTTAGCAGACCGTGCTGATGGACAGAGGATACCGATTGAATTTGATCAATCAACTGGGAAATCGATAGGGGAAAACAAGACAAAGTTCAAGAGTTATTTGGGTTTCCTTGGTCGAAGCAAAATCAGTATTTTGATAGAAGATTGGGATTCCGTAGATGCGAATGTGAAGGATGAAATTTGGACAGAGATCCTGAAAATATGGGATGTTCCTAATTCTGGCTTCTTACGAAAGAAATGGATTGCATATGTGGGCGAGCGTTGGAGGGCATTTAAGACTAATTTGACTTCTAGATATATACATGGGGATCTTAGGGGACAATCGCCTCTCGAGGCCTATAATTTTCTTGATGAGGAAACATGGCAAGCGTTTGTTCAGATGCGACTGGACCCTGCCTTTCAGGAGATAAGAAAGAAAGCTCAAATGAGTTCGGCTCATCATACAACCCCTCACAGATTGTCTCGTGGGGGATATGAGTTGCTCCAAGAGAAGATAATGCAAGAGAAGTTAAAACAAAAGCAAGGTTCATTAGGTGATTCGGTAGCTGCACCTCCGTCTCCACCAGCACGTCATGAGCAATGGAAGAGAGCCCGACAAAAGCCATCAGGAGATTACACATCAGAGGACTCACGCATTATTGCGGAGAAAATTGATTCTCTGGTCGAAAAAACAGCTCAAGGAACTTTTGTTCCACAAGGACGTAAAGATATTTTGGCAGAAGCCATTGGCAAACCTGAGCACTCTGGTTTTGTTCGTGGTGTTGGTCGAGGTGTGGGTATTCGGCAATACTTTGGACCACTTGAACGTGACTCCACCCCACCTGTTTTTAGTAGCGAACAATTAAGGACCATAAAAGTGGAGCTTACTCAGCAAATTAAAGAGGAATTGATGCAGGATCTGGAAGCTATGGGTTTTTCTAAAAAACCCTCGAATTTCCCAACTCACTCTCCTAATACCGTTGTACCTGCGAGCACAAAAGGTAGTTCTTCCGATGTGCCTCCTATACCAGAGGAGGATGAAATCCCAGAACGATGTGAATTGTACGTTGATGATTTGCTTCATGCAGTGGCCTATGGCAATATTTACAAGTTGGGGCCTACCATACATAATCAGATACTAGAAAATGATATGGTGAGGGTGGTTGTTAGTGAGGTGTTAGATGCTAACGCTCAAGTGCCTATGCCCACTGATGAGGTGGAAACGGTTGGGCAGGCCCTCAACAATTTCGTTCAATGGCCAAAAAGACTAGTGGAGATTGTTTCTGATAAGGATGTTGATGGATATGAAAAAGATGATGTTTCACCCAAAAGGTCGGACCCTCATGATGTTTCACCCAAAAGGTCGGACCCTCAACTAGATTCTGTTCAACAATTGGTTTTAAAGGCGATGTGTATGTCAGAATCTATAAAGCTTGAGTTGGAACACGATAAAATGAAGTCTCTTTGGCTCTCACAGAGAGATATTATGGAGTTGTGTATGGGTAAACAAGAGTTATCCATAACTATTCTACGATTGTGGTTAACGTATTTGAATCGCCTCTCAATTAATGTGGGTAAGAGTGACTTATATGGATTTATTGATCCATGTTTCATTCAAAGTCAACATGATCCAAGTAATGCTGAAGCCTACATACAAAATAAGTTATGCGATGATAAAAAAGAGTGTTACCTAGCACCTTATTATAATAATCGTCATTGGCAATTGCTCATTATTTGTCCTAAGAAGAATAATGTAGTATTCCTATGTTCGCTGGAAAGAAAGCCAGATAAAAATATTATTCAAACTGTTGATTCAGCTTTGGATGAATATCATAAGCTGCAAGGTGTTCAAAAGAAGAAGCCAACATGGATTGTCCCTGTTTGTCAAAGACAACCTGAGAGTTATGAGTGCGGCTACTATATTATGATACATATGTTGAAAATTGTATCTGATGGGATTATTGATTCATGGAAGAAGATATTTGGAAATCCTGAGCCATTCGATGAGGATGAACTTATAAACGTCCGACAACGTTGTGCAAGTTTGATTCTTGAATTTATTCAAGGAACTAAAAATGTTTGA 3642 0.4261 MKRIHTANRFEKHKPQEKQTTPPQIMKFVTEAQPSPSSSAVLEDGWSNDATFTLIDAWGKLSKTLNRKYLRQYHWKEIAKTINDHHGYSRKERRTYVHCKNRFEALKKKYAIEKARVSENELYDDEWLFFEKLDSVLGDGLPAKNVSPPVEPTADVPAWALAPVGRRSGAQNTEKQPVQVRMSSESEEEGSRFRRNVASQKSLAPMTMTSSPESVEESRSLRSLSAQKRLSPVITTSSLESAGDLRFRRNLSAFAAAAAAAAEVEVDNSDSYNSDSDDSDFNYEGYDSEVSNESKKRKRGRRDVELGHREVAGRKDRELGYREVTNAMEKLGEVHERVESSKQRKNVDLEKQKMQKQKMQFSKDSQKVQFSEGSQRMEFLKDAQTRWMQFLEDQTQRIQSSEGSQRMQFSRDSQTQRVQYPEDSQRWRVQYPKDSPRMQFSKDSQTQRMQFPEDSQRSRVQYPKDSQTQRMQFPEDSQRMQFSKDSQRMQQQKTNNSKHMDDVSAPSRSRLDSQSTKKKVRGPTLMKKLADRADGQRIPIEFDQSTGKSIGENKTKFKSYLGFLGRSKISILIEDWDSVDANVKDEIWTEILKIWDVPNSGFLRKKWIAYVGERWRAFKTNLTSRYIHGDLRGQSPLEAYNFLDEETWQAFVQMRLDPAFQEIRKKAQMSSAHHTTPHRLSRGGYELLQEKIMQEKLKQKQGSLGDSVAAPPSPPARHEQWKRARQKPSGDYTSEDSRIIAEKIDSLVEKTAQGTFVPQGRKDILAEAIGKPEHSGFVRGVGRGVGIRQYFGPLERDSTPPVFSSEQLRTIKVELTQQIKEELMQDLEAMGFSKKPSNFPTHSPNTVVPASTKGSSSDVPPIPEEDEIPERCELYVDDLLHAVAYGNIYKLGPTIHNQILENDMVRVVVSEVLDANAQVPMPTDEVETVGQALNNFVQWPKRLVEIVSDKDVDGYEKDDVSPKRSDPHDVSPKRSDPQLDSVQQLVLKAMCMSESIKLELEHDKMKSLWLSQRDIMELCMGKQELSITILRLWLTYLNRLSINVGKSDLYGFIDPCFIQSQHDPSNAEAYIQNKLCDDKKECYLAPYYNNRHWQLLIICPKKNNVVFLCSLERKPDKNIIQTVDSALDEYHKLQGVQKKKPTWIVPVCQRQPESYECGYYIMIHMLKIVSDGIIDSWKKIFGNPEPFDEDELINVRQRCASLILEFIQGTKNV* 1214
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr2g3188 1213 MobiDBLite consensus disorder prediction 954 978 - -
Mtr2g3188 1213 Pfam Myb/SANT-like DNA-binding domain 44 135 IPR044822 -
Mtr2g3188 1213 PANTHER OS10G0338966 PROTEIN-RELATED 459 1158 - -
Mtr2g3188 1213 MobiDBLite consensus disorder prediction 263 307 - -
Mtr2g3188 1213 MobiDBLite consensus disorder prediction 718 736 - -
Mtr2g3188 1213 SUPERFAMILY Cysteine proteinases 996 1205 IPR038765 -
Mtr2g3188 1213 MobiDBLite consensus disorder prediction 397 423 - -
Mtr2g3188 1213 MobiDBLite consensus disorder prediction 954 975 - -
Mtr2g3188 1213 MobiDBLite consensus disorder prediction 165 229 - -
Mtr2g3188 1213 MobiDBLite consensus disorder prediction 289 307 - -
Mtr2g3188 1213 MobiDBLite consensus disorder prediction 836 858 - -
Mtr2g3188 1213 Gene3D Adenoviral Proteinase; Chain A 971 1206 - -
Mtr2g3188 1213 Pfam Ulp1 protease family, C-terminal catalytic domain 1079 1201 IPR003653 GO:0006508|GO:0008234
Mtr2g3188 1213 MobiDBLite consensus disorder prediction 699 736 - -
Mtr2g3188 1213 PANTHER MYB/SANT-LIKE DNA-BINDING DOMAIN PROTEIN 459 1158 - -
Mtr2g3188 1213 MobiDBLite consensus disorder prediction 397 540 - -
Mtr2g3188 1213 MobiDBLite consensus disorder prediction 437 511 - -
Mtr2g3188 1213 MobiDBLite consensus disorder prediction 1 22 - -
Mtr2g3188 1213 MobiDBLite consensus disorder prediction 524 538 - -
Mtr2g3188 1213 Gene3D - 46 111 - -
Mtr2g3188 1213 MobiDBLite consensus disorder prediction 181 195 - -
Mtr2g3188 1213 MobiDBLite consensus disorder prediction 834 863 - -
Mtr2g3188 1213 MobiDBLite consensus disorder prediction 196 229 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr2g3188 Mtr-Chr2 45670454 45676819 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr2g3188 36 361 Trihelix Transcription Factor Family AT3G14180 29.060 1.70e-24 106
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Mtr2g3188 Peptidase_C48 3.4e-05 CL0125
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr2g3188 - - mtr:MTR_2g092960 2260.34
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr2g3188 2 45670454 45676819 Mtr2g3188 2 45670454 45676819 ECH