Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr2g3168 ATGGAAATGGATGATTTTGCTTCAAGTAGAATTAATGATGGTTGTTTTCAAGGTGTAAATGGAAATGGATATGGTTCATCTTCTTCACTGGTTTTAGATAGAGAAAAAGGAGAGCTTGTGGAGGCAGCTGTGAAATTGGAAAGAAAGGGTGTATCACCTGAGAGAAGTATTGAAGCTTTGAAGAATCATAGTGAAGCAGAAAGAAGGAGAAGAGCAAGAATTAATTCACATCTTGATACACTTCGTAGTGTTATTCCAGGGGCTAATAAGTTGGACAAAGCATCCTTACTAGCTGAAGTTATTACACATTTGAAAGAGCTGAAAACAAATGCAGCACAAGCAAGTGAAGGGTTAGTTATTCCAAAAGACAGTGATGAGATAAGAGTTGAATCACAAGAAGGTGGATTAAATGGTTTGCCTTATTCAATTAGAGCATCATTATGTTGTGAATATAAACCCGGTTTATTGTCTGATATAAGAAAAGCACTTGATGCACTTCATCTTATGATAATAAGGGCAGAGATTGCAACTTTGGGAGGTAGAATGAAAAATGTCTTTGTCATAATTAGCTGCAAAGAACAAAATTTTGAAGATGCTGAGTATCGACAGTTTCTTGCCGGATCGGTTCATCAAGCTCTTAGATCTGTACTTGATAGATTTTCTGTTTCACAAGATATCTTAGAAACTAGAAAGAGAAGGAGGATTTCTATATTTAGTTCTTCATCTTTAGGTGATTTCTTATAA 744 0.3535 MEMDDFASSRINDGCFQGVNGNGYGSSSSLVLDREKGELVEAAVKLERKGVSPERSIEALKNHSEAERRRRARINSHLDTLRSVIPGANKLDKASLLAEVITHLKELKTNAAQASEGLVIPKDSDEIRVESQEGGLNGLPYSIRASLCCEYKPGLLSDIRKALDALHLMIIRAEIATLGGRMKNVFVIISCKEQNFEDAEYRQFLAGSVHQALRSVLDRFSVSQDILETRKRRRISIFSSSSLGDFL* 248
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr2g3168 247 Pfam Helix-loop-helix DNA-binding domain 62 107 IPR011598 GO:0046983
Mtr2g3168 247 Gene3D - 54 116 IPR036638 GO:0046983
Mtr2g3168 247 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 58 107 IPR011598 GO:0046983
Mtr2g3168 247 PANTHER TRANSCRIPTION FACTOR BHLH30 1 247 IPR045847 GO:0003700|GO:0006355
Mtr2g3168 247 PANTHER TRANSCRIPTION FACTOR BHLH FAMILY-RELATED 1 247 - -
Mtr2g3168 247 SMART finulus 64 113 IPR011598 GO:0046983
Mtr2g3168 247 SUPERFAMILY ACT-like 146 223 IPR045865 -
Mtr2g3168 247 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 51 110 IPR036638 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr2g3168 Mtr-Chr2 45443178 45445444 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr2g3168 45 236 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G68810 41.327 1.07e-33 123
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Mtr2g3168 HLH 3.7e-12 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr2g3168 - - gmx:100783322 390.193
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr2g3168 2 45443178 45445444 Mtr2g3168 2 45443178 45445444 ECH