Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr2g3146 ATGGGAATGAAGAGCACAGGAGGAGAAATAGTTCAAGTTCAAGGAGGCCACATTGTAAGGGCGACAGGTAGAAAAGACAGACATAGTAAGGTATACACTGCGAAAGGTCCTCGTGATCGACGTGTTCGATTATCAGCACACACAGCAATTCAATTCTATGATGTTCAAGACCGTCTCGGCTACGACAGACCGAGTAAAGCTGTTGATTGGCTTATCAAAAAGGCTAAGTCTGCCATTGACAAACTTGATCAGCTTCCACCATGGAATCCAATTCCAAATGCAACAGAAGAGTTACAAGAGGAAGAGAATAATAATAATAATGCAGTAGAAACAAATGAAATGGTTATTGCAGCAGAACAATCAGAATCTTCTGGTTACAATTTGCAGCAGAACAATCATCATAACCATAACCATTCAGGTTTCATTCAATCAACTATTGATAATGATGCTATAGCATTTTTTCCAACAACTTCTGTTGGTGAATCTATGAATTTTCAAAGCTACTCTTCTGATATAATCTCAAGAACAAACAACTCAACACAGGATCTTGGTCTTTCTCTTCATTCATTCCAAGACAATTCAGCTTCAAATGATCAAACACTTTTCTCTGGATCAAATCCTGTTGGATTTGATGCTAATTATAACAGGATTGTGAATTGGAACACAGCTGATATGAATAGAACCGGGTTTATGGTTAATTCGCCTGCGTTTCTTGGCCAAGGTTCGACTTTTTCCGCCCATAGGGGGACCCTTCAGTCCAGTTTTTCGCCATCACTTCGTCCTTGGAATGATATTCCAATTGCGGATGCCTCGGTGGATCATCATAATCACAAGTCTCAACAACAAATTCACCAAGCTTCTATCTTCGGTAGCAGGTTTCTGTCTGATGCTTTGACAGGTTTCTGTATTCCTGCTAGAATTCAAGGTGAGGATGAGAGCCATGGAGTTGGTTCCGAAAGGCCATCCTCTTCTTCTAATTCTCATCACTAA 990 0.403 MGMKSTGGEIVQVQGGHIVRATGRKDRHSKVYTAKGPRDRRVRLSAHTAIQFYDVQDRLGYDRPSKAVDWLIKKAKSAIDKLDQLPPWNPIPNATEELQEEENNNNNAVETNEMVIAAEQSESSGYNLQQNNHHNHNHSGFIQSTIDNDAIAFFPTTSVGESMNFQSYSSDIISRTNNSTQDLGLSLHSFQDNSASNDQTLFSGSNPVGFDANYNRIVNWNTADMNRTGFMVNSPAFLGQGSTFSAHRGTLQSSFSPSLRPWNDIPIADASVDHHNHKSQQQIHQASIFGSRFLSDALTGFCIPARIQGEDESHGVGSERPSSSSNSHH* 330
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr2g3146 329 PANTHER TRANSCRIPTION FACTOR TCP4-RELATED 2 329 IPR005333 GO:0003700
Mtr2g3146 329 Coils Coil 91 111 - -
Mtr2g3146 329 Pfam TCP family transcription factor 23 136 IPR017887 -
Mtr2g3146 329 MobiDBLite consensus disorder prediction 309 329 - -
Mtr2g3146 329 PANTHER TRANSCRIPTION FACTOR TCP4 2 329 - -
Mtr2g3146 329 ProSiteProfiles TCP domain profile. 24 82 IPR017887 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr2g3146 Mtr-Chr2 45179990 45182626 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr2g3146 8 326 TCP Transcription Factor Family AT3G15030 40.852 8.22e-75 234
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF TCP Mtr2g3146 TCP 1.5e-33 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr2g3146 - - gmx:100814907 433.721
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr2g3146 2 45179990 45182626 Mtr2g2567 2 38602011 38603826 ECH
Mtr2g3146 2 45179990 45182626 Mtr8g1665 8 24588897 24591751 ECH
Mtr2g3146 2 45179990 45182626 Mtr2g3146 2 45179990 45182626 ECH