Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr2g3145 ATGAGTAACCCTAATGATGATCGAAACCATGATGATCATGATTATTATCCATTCGGAAATTTCTATCGTGGATCAAGTCAGAGTAACTTCAACAAAAAAATCTTGCTTACTGCCATAGTTTCTTTAGCACTTGTATTGATTTTGGTCTTAGCTCTACACCTCTATGCAAGGTATGTTCTCAAACGCCAAGCTCGCCGGAGAGCTGCCATTCAACAACTCAGCCTCACCGTCGCTCAAGCTCACACTCAATTCGCCGAGCCAGCCAACACCGGAGTCGACCCTACAATCATCGCTGCTCTTCCCACTTTCCTCTTCAAACAAAAGCAACAAGAAGAAAACAAAAATGTTTCCAAGAATATTGTTGAATGCGCAGTGTGTTTGAGTGTTGTCGAAGATGAAGAAATGATGAGGTTGCTTCCTAATTGTAAGCATAGTTTCCATGTGGGTTGTATTGATAAGTGGTTAGCTTCGCATTCCACCTGTCCAAATTGTCGAACCAAGGTTGAACCGCGGCCGGAAGCAGAGCCACGTGAGGGTCCCACTTTGTTTATATCACCATCCGAAGGTACATCGGATGGTGGTAGTGTGTCCCCCAAAAATATTTCAAGGTTGAGCTCTTTTCGTAGAATTCTCACTAGGGATAGATCTTCGAGAAGAATCCAACCTTCTAGTACTCCTCGTGAAGATATTATTATTGATCGTGATTTAGAGAGACAGTAA 720 0.4278 MSNPNDDRNHDDHDYYPFGNFYRGSSQSNFNKKILLTAIVSLALVLILVLALHLYARYVLKRQARRRAAIQQLSLTVAQAHTQFAEPANTGVDPTIIAALPTFLFKQKQQEENKNVSKNIVECAVCLSVVEDEEMMRLLPNCKHSFHVGCIDKWLASHSTCPNCRTKVEPRPEAEPREGPTLFISPSEGTSDGGSVSPKNISRLSSFRRILTRDRSSRRIQPSSTPREDIIIDRDLERQ* 240
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr2g3145 239 MobiDBLite consensus disorder prediction 213 239 - -
Mtr2g3145 239 PANTHER RING FINGER DOMAIN-CONTAINING 27 239 - -
Mtr2g3145 239 MobiDBLite consensus disorder prediction 164 201 - -
Mtr2g3145 239 Pfam Ring finger domain 122 165 IPR001841 -
Mtr2g3145 239 SMART ring_2 123 164 IPR001841 -
Mtr2g3145 239 CDD RING-H2_EL5_like 122 165 - -
Mtr2g3145 239 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 77 171 IPR013083 -
Mtr2g3145 239 ProSiteProfiles Zinc finger RING-type profile. 123 165 IPR001841 -
Mtr2g3145 239 SUPERFAMILY RING/U-box 97 173 - -
Mtr2g3145 239 PANTHER RING-H2 FINGER PROTEIN ATL40-LIKE 27 239 - -
Mtr2g3145 239 MobiDBLite consensus disorder prediction 184 201 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr2g3145 Mtr-Chr2 45169573 45170795 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr2g3145 2 239 C3H Transcription Factor Family AT2G42360 43.580 7.90e-55 174
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr2g3145 K19038 - gmx:100796057 194.512
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr2g3145 2 45169573 45170795 Mtr2g3145 2 45169573 45170795 ECH