Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr2g3143 ATGGCACAATTACCTCCTAAGATCCCAAACATGTCACCAAGTTGGCCAGATTTTTCCACACAGCAAAAAAACATTATGCCAACATCCATTTCAACCAATAACATTGTCACCACAAATAATTACCAGAATCAAAACCCTTCATGGGTGGATGAGTTCCTCGACTTTTCCTCGGCAAGGCGAGGCGCTCATAGAAGGTCGGTCAGCGATTCAGTCACATTCTTAGAAACACCAATGCTCGATGGAAAACACGATGGTAACAACAATGACAACGAGTTCGACAAGTTTGATGATGAACAATTTTTGTCCATGTTCAGTGATGAAATATCTGGTGTCAATAACATGCCACCAACATTGTCTTCGTCGAACCCTTCGAGTCCTTCAGATCAGAATTTTGTCAATAATGATAATGAGAAAGAGAAGAAGGAGAATGATTTAGGAGAGATGAAGAAAGAGGAAGATGAGAAGCAATTGAAATATGAACCTGATGAGGTAGAAAGCCAATGCAAACAGGAAAATTCACAGCCTCAAAGTAACAACAACAATGTCACTTCTTCTAATGATAGAATTACTGATCCAAAGAGAGTCAAAAGAATCTTGGCGAATAGGCAATCAGCACAAAGGTCACGTGTGAGGAAGCTGCAATACATATCAGAGCTTGAGCGTAGTGTAACTTCATTGCAGACCGAAGTTTCAGTGCTATCTCCAAGAGTTGCATTTTTGGATCATCAACGCTTGCTTCTAAATGTTGATAACAGTGCTCTCAAGCAAAGAATTGCAGCCCTTGCACAAGACAAGCTATTCAAAGATGCACATCAAGAGGCACTGAAGAGGGAGATAGAAAGATTAAGACAAGTATATCACCATCAGAACCTCAAGAAGATGGAAAATGCTAATGGATCACCCTTACCATCCCCATCACAAAAGCCAATATGTGATTCTCAAACAGAAAACGAACAACTTCTCAATGGAAACACATGTGCATCAGTGGCATCAAAAGAAAGGGTGGAAGAAACAGTTGTGTCTGCTTTAACATGA 1035 0.4029 MAQLPPKIPNMSPSWPDFSTQQKNIMPTSISTNNIVTTNNYQNQNPSWVDEFLDFSSARRGAHRRSVSDSVTFLETPMLDGKHDGNNNDNEFDKFDDEQFLSMFSDEISGVNNMPPTLSSSNPSSPSDQNFVNNDNEKEKKENDLGEMKKEEDEKQLKYEPDEVESQCKQENSQPQSNNNNVTSSNDRITDPKRVKRILANRQSAQRSRVRKLQYISELERSVTSLQTEVSVLSPRVAFLDHQRLLLNVDNSALKQRIAALAQDKLFKDAHQEALKREIERLRQVYHHQNLKKMENANGSPLPSPSQKPICDSQTENEQLLNGNTCASVASKERVEETVVSALT* 345
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr2g3143 344 SUPERFAMILY Leucine zipper domain 193 247 IPR046347 GO:0003700|GO:0006355
Mtr2g3143 344 Pfam bZIP transcription factor 193 236 IPR004827 GO:0003700|GO:0006355
Mtr2g3143 344 MobiDBLite consensus disorder prediction 133 167 - -
Mtr2g3143 344 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 196 211 IPR004827 GO:0003700|GO:0006355
Mtr2g3143 344 SMART brlzneu 189 253 IPR004827 GO:0003700|GO:0006355
Mtr2g3143 344 MobiDBLite consensus disorder prediction 108 193 - -
Mtr2g3143 344 MobiDBLite consensus disorder prediction 294 315 - -
Mtr2g3143 344 CDD bZIP_plant_RF2 194 244 IPR044759 GO:0003700|GO:0006355
Mtr2g3143 344 Gene3D - 192 291 - -
Mtr2g3143 344 MobiDBLite consensus disorder prediction 108 132 - -
Mtr2g3143 344 Coils Coil 272 292 - -
Mtr2g3143 344 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 191 243 IPR004827 GO:0003700|GO:0006355
Mtr2g3143 344 Coils Coil 134 158 - -
Mtr2g3143 344 PANTHER BASIC LEUCINE ZIPPER 34 1 321 - -
Mtr2g3143 344 MobiDBLite consensus disorder prediction 168 188 - -
Mtr2g3143 344 MobiDBLite consensus disorder prediction 1 22 - -
Mtr2g3143 344 PANTHER BZIP FAMILY TRANSCRIPTION FACTOR 1 321 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr2g3143 Mtr-Chr2 45131287 45135289 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr2g3143 1 270 bZIP Transcription Factor Family AT3G58120 58.276 3.71e-101 298
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Mtr2g3143 bZIP_1 3.9e-09 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr2g3143 - - cam:101507538 521.546
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr2g3143 2 45131287 45135289 Mtr2g3143 2 45131287 45135289 ECH