Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr2g3131 ATGGACAATAGAGAAATTTCAAATGGTTTTCTTCATGAAAATACAACAAGTTCATCAAATGAAAATCCTCCTATTTTAAAGAGGAAAAGAAATCTCCCTGGAAATCCAGATCCTGAAGCAGAAGTGATATCTTTATCACCAAAAACATTGATGGCAACAAACAGATTCGTGTGTGAAATTTGTCTAAAGGGTTTTCAAAGGGATCAAAATCTTCAACTTCATCGACGTGGACATAACCTACCTTGGAAGCTGAAACAAAGAACAAGTAAAGAAATAAGGAAGAGAGTGTATGTGTGTCCAGAGAAGACATGTGTTCATAATCATCCTTCAAGGGCTTTGGGAGATTTAACTGGGATAAAGAAGCACTTTTGTAGGAAACACGGTGAGAAGAAGTGGAAGTGTGAGAAGTGCTCAAAATTTTATGCTGTTCAATCGGATTGGAAAGCACACTCAAAGACTTGTGGTACTAGAGAATACAAATGTGATTGTGGCACTATCTTTTCAAGGAGGGATAGCTTTGTCACTCACAGGGCATTTTGTGATGCCTTAGCAGAAGAAACAGCTAGAATAAATGGATCAACAAACATAAACAACTCATTATTAGGAATGGGAGGTAACAACATTGGTAATTACAACATTATGCAAAATTCTCTTGTCCCTAACATAGGAACTCATTTTTCTTCAATTTTCAAACCAATCTCATGCACAAACCATGAAACAACTAATCAAACATCTAGGTCAGGTTTATCTCTTTGGATGTCTCAAACATCTCATGACACAATATTGGCTAATAATAGTAATTTGCATGAGATTCATGAAAATTGGGTGTTTGGAAATAAATTCTCCTCTAATAATGAATGTCAAGAGTTAACTAGTTCTATTTCACTTCCACTAGTGAATAATAACATTGATAATAAGGATAGTACTACAAGTACAAACAATCTTGTTAGTGTTCCTTCCTTGTATAGCTCACAACACCAATCACAATCTCATCATCAAACAACCTCAGCAAACATGTCAGCAACAGCTTTGTTGCAAAAAGCTGCTCAAATTGGGACAACTTCAACTGAATCATTATTCCTTGGAAGCTTAGGTTTGAGATGCAATAGTCCAAGTCAAGATCATGGGAACAAATTTTGTGGGGTGTATGGTTCAAGTTCAGTTCTTACATCAAGTGATCTTGGGTCAGCTGAGAGCTATATTTCAGGTGAATTGTCACAAATGCCCTCCATAAAACGAAGGCGGGTGCAAAATGAAGAGGGTGTTTGGGGACAAACTAGGGATTTTCTTGGTGTTGGTGGTGCTAACCATTTGCCACAGTTCATCAATCGACGGATGGATTTGATTTGA 1350 0.3696 MDNREISNGFLHENTTSSSNENPPILKRKRNLPGNPDPEAEVISLSPKTLMATNRFVCEICLKGFQRDQNLQLHRRGHNLPWKLKQRTSKEIRKRVYVCPEKTCVHNHPSRALGDLTGIKKHFCRKHGEKKWKCEKCSKFYAVQSDWKAHSKTCGTREYKCDCGTIFSRRDSFVTHRAFCDALAEETARINGSTNINNSLLGMGGNNIGNYNIMQNSLVPNIGTHFSSIFKPISCTNHETTNQTSRSGLSLWMSQTSHDTILANNSNLHEIHENWVFGNKFSSNNECQELTSSISLPLVNNNIDNKDSTTSTNNLVSVPSLYSSQHQSQSHHQTTSANMSATALLQKAAQIGTTSTESLFLGSLGLRCNSPSQDHGNKFCGVYGSSSVLTSSDLGSAESYISGELSQMPSIKRRRVQNEEGVWGQTRDFLGVGGANHLPQFINRRMDLI* 450
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr2g3131 449 PANTHER SERINE/THREONINE-PROTEIN KINASE RIO 1 448 - -
Mtr2g3131 449 ProSitePatterns Zinc finger C2H2 type domain signature. 58 78 IPR013087 -
Mtr2g3131 449 Gene3D Classic Zinc Finger 89 180 - -
Mtr2g3131 449 SUPERFAMILY beta-beta-alpha zinc fingers 55 152 IPR036236 -
Mtr2g3131 449 MobiDBLite consensus disorder prediction 8 25 - -
Mtr2g3131 449 MobiDBLite consensus disorder prediction 1 38 - -
Mtr2g3131 449 ProSiteProfiles Zinc finger C2H2 type domain profile. 56 78 IPR013087 -
Mtr2g3131 449 PANTHER F-BOX ASSOCIATED PROTEIN 1 448 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr2g3131 Mtr-Chr2 44997696 45000669 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr2g3131 22 433 IDZ Gene Family AT1G03840 52.597 5.86e-142 414
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Mtr2g3131 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr2g3131 K25870 - gmx:100778666 614.379
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr2g3131 2 44997696 45000669 Mtr2g3131 2 44997696 45000669 ECH