Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr2g3129 ATGACTCAGTGTAGTTACCCTGAAAATAATCATAGTACTATCCTTATGGAGAGACGCAAAGATAGCTTAATCAGAACTTGTCCTACATGTGGTCATCATATCAAATGCCAAGATCAGGGTGCTGGAATTCATGAGTTACCTGGACTACCTGCTGGGGTGAAGTTTGATCCAACTGATCAAGAGATTCTTGAACATTTGGAAGCAAAAGTGAGGTCTGATATTCAAATGCTTCATCCTTTAATTGATGAATTCATCCCTACTCTTGAAGGAGAGAATGGAATCTGCTGTACTCATCCAGAGAAGTTACCAGGAGTCGGCAAAGATGGACTGATCCGACATTTCTTTCACAGGCCATCAAAAGCATACACAACAGGAACAAGAAAAAGAAGAAAAGTGCACACAGATGCTGATGGAAGTGAGACAAGATGGCACAAAACAGGTAAAACAAGGCCAGTTTTCGTGAGTGGCAAGTTAAAAGGGTATAAGAAAATTCTTGTGCTTTACACTAACTACAGAAAGCAAAGAAAGCCAGAGAAAACAAATTGGGTTATGCACCAATACCATCTTGGAAACAATGAAGAGGAGAAAGAAGGGGAATTGGTAGTTTCCAAAGTTTTCTACCAAACACAGCCTAGACAATGTGGTGGTTCATTGATGAAAGACTCGGCATCATTTTCTGATAAAAAACTAAATGGTGATCAAGGTGTGCATGAGGTGGTTAATCATAAAACCAGTGGATTTGTTGAATACTATAGTACTTCTTTCATATCTTTTGATCAAGGGGAACAACATAGATCAAACAATGCTCAAGTGATTTCACATTTTCCTGTCCATGATGGTACTTCTTTCATTCCTTGA 858 0.3893 MTQCSYPENNHSTILMERRKDSLIRTCPTCGHHIKCQDQGAGIHELPGLPAGVKFDPTDQEILEHLEAKVRSDIQMLHPLIDEFIPTLEGENGICCTHPEKLPGVGKDGLIRHFFHRPSKAYTTGTRKRRKVHTDADGSETRWHKTGKTRPVFVSGKLKGYKKILVLYTNYRKQRKPEKTNWVMHQYHLGNNEEEKEGELVVSKVFYQTQPRQCGGSLMKDSASFSDKKLNGDQGVHEVVNHKTSGFVEYYSTSFISFDQGEQHRSNNAQVISHFPVHDGTSFIP* 286
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr2g3129 285 MobiDBLite consensus disorder prediction 122 144 - -
Mtr2g3129 285 MobiDBLite consensus disorder prediction 128 144 - -
Mtr2g3129 285 Gene3D NAC domain 58 212 IPR036093 GO:0003677|GO:0006355
Mtr2g3129 285 PANTHER NAC DOMAIN-CONTAINING PROTEIN 73 1 284 IPR044799 GO:0003700
Mtr2g3129 285 Pfam No apical meristem (NAM) protein 50 189 IPR003441 GO:0003677|GO:0006355
Mtr2g3129 285 ProSiteProfiles NAC domain profile. 49 208 IPR003441 GO:0003677|GO:0006355
Mtr2g3129 285 PANTHER NAC TRANSCRIPTION FACTOR-LIKE PROTEIN 1 284 - -
Mtr2g3129 285 SUPERFAMILY NAC domain 44 208 IPR036093 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr2g3129 Mtr-Chr2 44989689 44991518 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr2g3129 25 285 NAC Transcription Factor Family AT4G28500 62.989 1.48e-117 338
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Mtr2g3129 NAM 8.4e-22 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr2g3129 - - gmx:100791648 512.301
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr2g3129 2 44989689 44991518 Mtr2g3129 2 44989689 44991518 ECH