Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr2g3125 ATGCTAGCAGTGGCACCATTGAGTAGCATAAGAGATGAAAGCCAAAGAGAAATGGAGGAGAATTTATCAATTGAGACATGTGACTTTGCTGATCTTTCCGAAGGGAACTTATTGGAAAGCATCAATTTCGAATTCGATGATGATTTCTTCGTATGCTTCAACGACGGAGATGTGTTACCGGATCTTGAGATGGACCCGGAAATGCTTGCTGAATTCTCCCTCAGCAGCAGCGGTGAGGAATCGGATATAAATTCGTCGGGTGCAAATAGCAAATCTTGTAATGATGGGAATATGGTTAGTATTGAGAGAAAATTACAAGATGAAGAGAAAGTAGTTTATTCTTCAGATTCAAGTTCGAGTCGTGTGGAAGAGATAATTAGCAAAAGAGATGAATCCGTTGTGCCGAATCCATTGCCTAAGGAAGGTGAGAAAGGAAGAAAATCATCATCTCAATCAAAGAATAATCCTCATGGGAAGAGAAAAGTGAAGGTGGATTGGACTCCAGAATTGCACAGAAGATTCGTACAAGCAGTAGAGCAGCTAGGTGTGGATAAAGCTGTACCTTCAAGAATTTTGGAAATTATGGGAATTGACTGCCTCACCCGCCATAACATCGCCAGCCACCTTCAAAAATATAGATCGCATAGGAAACATTTGTTAGCACGAGAAGCTGAAGCAGCAAGCTGGAGTCAAAGGAGGCAATTGTTTGGAACAAATAGAGGAGTTGGAGGAAAAAGAGATATTGTGAATCATTGGGTTGCACCAACCATGGGTTTCCCTCCCATGCCACCAGTACACCATTTTAGACCTTTACATGTATGGGGGCACCATCCTGTGGATCAGTCCTTTATGCACATGTGGCCTAAATATTCGCCGCACCAGCCACCGGCTAATTGGCCACCTGCGCGGCCGGCTCCACCTCCTAACGCTTCGTATTGGCACCAACGGGCTCCAAATGCACCAACTGCAGGAACACCATGCTTTCCACAACCTCTGACAACAACGAGATTTGGCTCTCCAACTGTTCCAGGCATTCCACCACCCCATGCCATGTACCAAGTAGACCCCGGTGTTGTTGTCCCCGCCGGTCAGCCATCTCCTCAGCCTCTTTTAGACTTCCATCCGTCAAAGGAGAGCATCGACGCAGCTATTAGTGATGTATTATCAAAACCCTATTTACCGTTGCCTCTTGGCCTTAAAGCTCCAGCACTTGAAGGTGTGATGGGTGAATTACAGAAACAAGGAGTTCCAAATATTCCACCATCTTGTGCTTGA 1275 0.4533 MLAVAPLSSIRDESQREMEENLSIETCDFADLSEGNLLESINFEFDDDFFVCFNDGDVLPDLEMDPEMLAEFSLSSSGEESDINSSGANSKSCNDGNMVSIERKLQDEEKVVYSSDSSSSRVEEIISKRDESVVPNPLPKEGEKGRKSSSQSKNNPHGKRKVKVDWTPELHRRFVQAVEQLGVDKAVPSRILEIMGIDCLTRHNIASHLQKYRSHRKHLLAREAEAASWSQRRQLFGTNRGVGGKRDIVNHWVAPTMGFPPMPPVHHFRPLHVWGHHPVDQSFMHMWPKYSPHQPPANWPPARPAPPPNASYWHQRAPNAPTAGTPCFPQPLTTTRFGSPTVPGIPPPHAMYQVDPGVVVPAGQPSPQPLLDFHPSKESIDAAISDVLSKPYLPLPLGLKAPALEGVMGELQKQGVPNIPPSCA* 425
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr2g3125 424 Gene3D - 158 219 - -
Mtr2g3125 424 MobiDBLite consensus disorder prediction 122 150 - -
Mtr2g3125 424 MobiDBLite consensus disorder prediction 73 96 - -
Mtr2g3125 424 Pfam Myb-like DNA-binding domain 164 213 IPR001005 -
Mtr2g3125 424 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 158 217 IPR017930 -
Mtr2g3125 424 MobiDBLite consensus disorder prediction 74 96 - -
Mtr2g3125 424 PANTHER TRANSCRIPTION FACTOR MYB-HB-LIKE FAMILY-RELATED 1 424 - -
Mtr2g3125 424 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 161 215 IPR006447 GO:0003677
Mtr2g3125 424 PANTHER TRANSCRIPTION ACTIVATOR GLK1 1 424 IPR044825 GO:0003700|GO:0045893
Mtr2g3125 424 SUPERFAMILY Homeodomain-like 159 218 IPR009057 -
Mtr2g3125 424 MobiDBLite consensus disorder prediction 122 163 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr2g3125 Mtr-Chr2 44931754 44935900 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr2g3125 28 330 G2-like Transcription Factor Family AT5G44190 42.415 7.20e-61 199
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Mtr2g3125 Myb_DNA-binding 5.4e-08 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr2g3125 - - gmx:100775671 572.778
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr2g3125 2 44931754 44935900 Mtr2g3125 2 44931754 44935900 ECH