Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr2g3112 ATGGTGTTTTTTTGTCTTGCAGATTTCAAGTATCATAAAGGATCCGATTCAGTGTTGGAAGTAAACAAACAAGATTATGATTCATGCAACACCAAGAATCCAATCCACGAGAGGGACAGTGGACATTCAACTTTCCTATTGGACAAATCAGGTCCCTTTTACTTCATCAGTGGAAAAGTTTCAAATTGTCTAAAGGGCGAAAAGTTGCATCTTGTTGTTTTGTCTCCACACCATGGCAAAGGACATCAAGGTCCATCATCATCACCTTTCGTTGCACCGGTACACTCCCCAGCAACGTCTCCAGCATGGATTGCTCCGACACCAAGTGCTACTAGATGGAATGCTCCTTCACCAAGTGCTATCGGTTGGAATGCTCCAACACACTCCCCATCACAATCACCTGCTTGGAAGGCTCCTTCACCAAGTGCTACCAGCAAGACTGCTCCAACACAATCACCGGTTTGGAATGCTCCTTCACCAAGTGCTACCGGCTGGACTGCTCCCGCACACTCCCCAACACAATCACCGACTTGGAGTGCTTCTTCACCAAGTGCTACCGGTTGGACTACTCCGACACACTCTCCAACACAATCACCGGCTTGGCATGCTCCTTCACCAAGTGCTACCGGTTGGACTGCTCCTGCACATTCTCCAACAAAATCATCGGGTTGGAATGCTCCGACACCAAGTGCTACCGGTTGGACTGCCCCTACACATTCTCCAGCACAATCATCAGCTTGGAATGCTCCGACACCAAGTCCTGCCAACATACATGCTCCGACTCCAAGTCCAACCGACGAAGATGCTCCAAAACCAAGTGATATTGACAATGACTCTCCAGCTCCATCTCCTGGTCATTCGGGTTCTAGGAGGTTGAGTGGTTTTGTTGGTGTGAGTGTTGTGGTGGCTTTGGTCTTAGGAAGCTTTGCTTTTTAG 936 0.485 MVFFCLADFKYHKGSDSVLEVNKQDYDSCNTKNPIHERDSGHSTFLLDKSGPFYFISGKVSNCLKGEKLHLVVLSPHHGKGHQGPSSSPFVAPVHSPATSPAWIAPTPSATRWNAPSPSAIGWNAPTHSPSQSPAWKAPSPSATSKTAPTQSPVWNAPSPSATGWTAPAHSPTQSPTWSASSPSATGWTTPTHSPTQSPAWHAPSPSATGWTAPAHSPTKSSGWNAPTPSATGWTAPTHSPAQSSAWNAPTPSPANIHAPTPSPTDEDAPKPSDIDNDSPAPSPGHSGSRRLSGFVGVSVVVALVLGSFAF* 312
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr2g3112 311 Pfam Plastocyanin-like domain 9 66 IPR003245 GO:0009055
Mtr2g3112 311 PANTHER BLUE COPPER PROTEIN 8 180 IPR039391 GO:0009055
Mtr2g3112 311 PRINTS Proline rich extensin signature 85 101 - -
Mtr2g3112 311 PRINTS Proline rich extensin signature 123 135 - -
Mtr2g3112 311 PRINTS Proline rich extensin signature 137 158 - -
Mtr2g3112 311 PRINTS Proline rich extensin signature 161 177 - -
Mtr2g3112 311 PRINTS Proline rich extensin signature 187 204 - -
Mtr2g3112 311 PRINTS Proline rich extensin signature 225 250 - -
Mtr2g3112 311 PANTHER EARLY NODULIN-LIKE PROTEIN 8 180 - -
Mtr2g3112 311 SUPERFAMILY Cupredoxins 9 74 IPR008972 -
Mtr2g3112 311 MobiDBLite consensus disorder prediction 77 96 - -
Mtr2g3112 311 ProSiteProfiles Phytocyanin domain profile. 1 75 IPR003245 GO:0009055
Mtr2g3112 311 MobiDBLite consensus disorder prediction 101 292 - -
Mtr2g3112 311 Gene3D - 5 73 IPR008972 -
Mtr2g3112 311 MobiDBLite consensus disorder prediction 102 254 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr2g3112 Mtr-Chr2 44812828 44813866 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr2g3112 9 309 Phytocyanin Superfamily AT4G27520 33.770 2.65e-22 93.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr2g3112 - - mtr:MTR_2g090575 590.112