Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr2g3104 ATGCCTGTACTGTTTTCAGATATGGTTGTTCCGATTGATGCCTCAAATGTTGATCCACCTGAGATTGAACCTCCTAATGCGTTGCCGCTTCTTTTACTTGAAGACGCGCATGATTCCGGTAATGCCAAATCCGAGAATCCCCCACCACCACCACCAAAACTTGAAATTTCTCTAGGTGGTTCGAAAGCAGAGGATGCTTCTCCTCCTATTCCTTCTGTTGTACCACCTTCAGTTGTTGCTGTTTGTATCGACCAGCGAGAACATTTTACTGCTAAACACAAGTTTGCAACACGGAATGATTTGTTGGAGTGGGTTGGAGAGAAATCTAGGAAGCTTGGTTTTTCCACTATTATTGGTAAATCCGATAACAGTGGCAATGGAAGAAGCGCATTTGTTACTTTGATATGTGAAAGGGGAGGTTCATACATCGAGTACAAGAGAAAGAGTCGACGTGAGATAGCTGGTTCGGTTAAATGCGAGTCTCCGTTTCGGCTGAGAGGTTACTTGTTGACCGGTGGTGAATGGAGCCTCAAAGTTAGTGATGGTAAACATAACCATGACATGACAGATGTGTTGAAAGGTCATAAAACCGTCGGTCGTCTAAACGCAAATGAACGTGTTCACCTTGAAGAGATGGTGGATTCAAACGTTCCTTCGAGGCAAATGCTTACCAACTTAAAGAAGAGGAATCGTACCAATTCAACTACTAGCAAACACGTTTATAATGCTTCTTATAGGAAGTATCATAATTCTGAGGTTGTCAGTGATGTTTTTTGGGCACATTCAGATTCTATCAAGTTGTTTAACACGTTCTCTAGGGATGGCAATGGGTACTCAATGGGTAGGACCCATAAAAGCGGTGTTTTACCCTACCCATTATGGATATTTTTTGCGGATATCCATTGGATCTGGGTCCAATTGCCATCCCTAACGTTCTCCACGGTGCTTGTCTTCGATTCAACATACAAGACAAACAATTATCGTCTTCCATTGCTTGAGTTTGTTGGTAACACCTCTACCATGAAAACATTCTATATTGCTTTTGCTTATATGATATATGAGAGGCAAGACAATGTTTATTGGGCGCTTGAGAGGTGTCGTGAGATGTTGCACTCCAAAGATCTCTATCCCAAAGTAGTTGTCACTGACCGGGACAATGCTTTGATCAATGTTGTGGAAAATGTTTTCCCTAAAGCTACAACTATGTTGTGCTCATATCACATTGGACAAAATGTGAGAGCAAAGTGTAAATTGGATTGCAAAGTGACGGATCTCAAAGGCAAGAATGGGCAAGCGATTAAGCATGCGTCGGTGGTGAAGACTGTGATGGCTGCATGGATGGATATTGTGGACTCCGACATAGAGGAAGCATATATTGATAATTGGACCCGGTTCAAAGTTCTATGCGCAAAATTTCCCAAGTTATAG 1428 0.4223 MPVLFSDMVVPIDASNVDPPEIEPPNALPLLLLEDAHDSGNAKSENPPPPPPKLEISLGGSKAEDASPPIPSVVPPSVVAVCIDQREHFTAKHKFATRNDLLEWVGEKSRKLGFSTIIGKSDNSGNGRSAFVTLICERGGSYIEYKRKSRREIAGSVKCESPFRLRGYLLTGGEWSLKVSDGKHNHDMTDVLKGHKTVGRLNANERVHLEEMVDSNVPSRQMLTNLKKRNRTNSTTSKHVYNASYRKYHNSEVVSDVFWAHSDSIKLFNTFSRDGNGYSMGRTHKSGVLPYPLWIFFADIHWIWVQLPSLTFSTVLVFDSTYKTNNYRLPLLEFVGNTSTMKTFYIAFAYMIYERQDNVYWALERCREMLHSKDLYPKVVVTDRDNALINVVENVFPKATTMLCSYHIGQNVRAKCKLDCKVTDLKGKNGQAIKHASVVKTVMAAWMDIVDSDIEEAYIDNWTRFKVLCAKFPKL* 476
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr2g3104 475 PANTHER PROTEIN FAR1-RELATED SEQUENCE 5-LIKE ISOFORM X1 148 466 - -
Mtr2g3104 475 Pfam MULE transposase domain 315 411 IPR018289 -
Mtr2g3104 475 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 148 466 IPR031052 GO:0006355
Mtr2g3104 475 MobiDBLite consensus disorder prediction 14 71 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr2g3104 Mtr-Chr2 44736680 44738701 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Mtr2g3104 MULE 1.2e-22 CL0219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr2g3104 - - mtr:MTR_2g090505 519.235