Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr2g3103 ATGATGATGTTAACCCCCCTTGATGGACAGATTGCTGCTCCAAACCATGTTTTCGCCCTAAATGGTGTGTTTTTGGAAGTGTTGGGAGTGTTTGTGATAAAGGAAGCATTACCATTACCTGATCAAGTCGACGAGGCTATAAACTACATAAAGAGCCTAGAGACAAATATAATGTTGGCAAAGGAGAAAAAAGAAAGTTTAATGGGAAACAAGAAGAGATCACGTGGTGGTTATGGAGCAAAAGGAAGCATAATAAAGTTGCCAAAAATAGAAATTCATGAAATGGGACCCACTCTACAAGTGATTGTAACATGTGGGGTTGATAAACATTTTATTTTCTGTGAAATTATGAGAATACTGCATGAAGAGAACGTTGAGGTTATTTCTTCAAATTCTTCTTTGACTGGTGATTCACTTCTTCATACCGTGCATGCCCAGATTCCGCAAACTTTGTTACAATTTGGAGCAACCAAAATAAGTGAGAGGTTGAAAGAGTTTGTGAACGGATCCATGAGCGATGTGGAAACAGAATCTCAAGTGTGGGATCTTGAAATTGGAAGTGAGAGTTGGGAGCTTCTACACTATGTGGTAACCAAGAGTTTGCCAAATCCTTAA 615 0.3886 MMMLTPLDGQIAAPNHVFALNGVFLEVLGVFVIKEALPLPDQVDEAINYIKSLETNIMLAKEKKESLMGNKKRSRGGYGAKGSIIKLPKIEIHEMGPTLQVIVTCGVDKHFIFCEIMRILHEENVEVISSNSSLTGDSLLHTVHAQIPQTLLQFGATKISERLKEFVNGSMSDVETESQVWDLEIGSESWELLHYVVTKSLPNP* 205
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr2g3103 204 PANTHER HELIX LOOP HELIX DNA-BINDING DOMAIN PROTEIN 35 174 - -
Mtr2g3103 204 Coils Coil 43 70 - -
Mtr2g3103 204 PANTHER ACHAETE-SCUTE TRANSCRIPTION FACTOR-RELATED 35 174 IPR015660 GO:0003700|GO:0006357
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr2g3103 Mtr-Chr2 44733711 44736490 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr2g3103 7 169 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G20970 30.508 3.13e-22 87.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr2g3103 - - mtr:MTR_2g090500 336.265