Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr2g3098 ATGTCTCTTCTCCTAATCCTTAACATAACACTATTACTTTTGTTGTCTTCAGTTTCATCAACTGAATTTGTTTATAACAGAAACTTCAACTCAACAAACATAAACCTTAATGGAAATGCAACAATTCAAAATTCAATCCTCACTCTCACAAACCAAACATTTTTCTCAATTGGTCGTGCTTTTTTCCCTCAAAAAATACCAACAAAACCAATCAAAAACTCTTCAAATTTTCTTCCATTTGCAACTTCTTTCATATTTTCCATCACTCCTTGCAAGAATTTCCCAGTTGCACATGGCTTTGCCTTCATTTTCTCACCATCAATGGTGATCAATGGTGCACAAACAGGAAACTATCTTGGACTGTTTAATAGAACCTCTTCAGGTAATGATTATAATCATGTCTTTGCAGTTGAGTTTGATGATTATAGGAATGAAGAGTTTAATGAAGTTAATGATAATCATGTTGGTGTTGATTTGAATTCTATTATTTCTAATTATTCTGAACCTGCTGAGTTTTGGGGTGGTGGAAAAAATGGTGATGAATTGGAAAAGTTGAAACTGTCTAGTGGTGAAAATTATCAAGTTTGGATTGAGTTTAGGGAGTTTGAAATTAATGTTACTATGGCTCCGGCGGGGAAAAGAAAACCTAATAGGCCTTTGATTAGCAAGCCTATTAATTTTTCTAGGGTTTTTGTGGATGAAATGTATGTTGGATTTTCGGGATCGACTGGGAGAATGGTTGATACTTGTAGAATTTTAGCTTGGAGTTTTAGTCATTCGAATTTTTCGATTGGTGATGCTTTGAATACTAAAAATTTGCCTACATATGTGAATCCAAAGAAATTCATATATAAATCTAAGGCTTTTGTTATAAGTGTGATTTTTGGTTCACTTTTAGTCTTTGGTTGTTGCATTTTGGTTTTTTTCATTTTGTTGAGAAAAAAGAAGGAAGAGAAAGAGGAAGAATTTGAAGATTGGGAATTGGAGTATTGGCCACATAAGATTAGCTATAAGGAGATTTGTGATGCAACAAGTGGATTTTCTGAAGAGAATGTGATAGGAATTGGAACAAGTGGGAAAGTATACAAAGGAGTTTTGAAAGGAGGAGACGAAGTTGCGGTGAAGAGATTCAATCATGATACTCAGCATGGAATGAGAGGCTTTCTAGCTGAGATTTCAAGCTTAGGAAGACTGAAACACAGAAACTTGTTGGGTTTCAAAGGTTGGAGTAAAGAAAAACGAGGGAAATTAATACTGGTTTTTGATTACATGGAGAATGAGAGTTTAGATAAAAGAATCTTTGAATGTGAAGAGACGAAGTTGCTTAATTGGGAAGAAAGAATAAGAGTCCTAGAAAATGTAGCTAGTGGAATTTTATATCTACATGAAGGTTGGGATTTTGAGGTTTTGCATAGAGATATTAAAGCAAGTAATGTGCTACTTGGCAAAGATATGAATGCAAGAATTGGTGATTTTGGTCTTGCAAGGTTGCAGCATCAAGAACGAGTAGCTGACACAACGAGTGTGATAGGTACTTTAGGGTACATGGCACCAGAACTAGTTAAAGTTGGTAAACCATCAACTGCAACTGATGTTTATAGTTTCGGAATATTGGTTTTAGAAGTTGTTTGTGGTAGAAGGCCTATTGTAACGGATGAACCACCATTGGTTGAATTGGTATTTTCTCTTATGGAGAAAGGTGAATTGAGTAGCGCAATTGATGAACGTTTGAAGGGTCAAATGGAGTGTAAATATAACACAGTCGTAGCTGAGAGATTGCTTCATTTGGGTTTGTTATGTGCTAGTGTAGACCCTGGTGTTAGACCTACAATGAGACAGGTTGTGAAAGCTTTGGAGGGTGTAAAATGCACTGAGTGTAATGAAGAGTGTGTTCATGTGAGTCTTATTGGAAAAATAAACTTAGCAGCATCATGGTCTAAGAATTCTTATGATTCGGCACGTTTAAACTCTCCTACCCTTGCTGATATTTTGCCATTCAAATATTTTTCTGGAGATTGTTTAAGTGTGTCTTATGCGAGTATGGAGCCATTGTCTGATTCTCTCTCAGAAGGAAGGTGA 2079 0.3569 MSLLLILNITLLLLLSSVSSTEFVYNRNFNSTNINLNGNATIQNSILTLTNQTFFSIGRAFFPQKIPTKPIKNSSNFLPFATSFIFSITPCKNFPVAHGFAFIFSPSMVINGAQTGNYLGLFNRTSSGNDYNHVFAVEFDDYRNEEFNEVNDNHVGVDLNSIISNYSEPAEFWGGGKNGDELEKLKLSSGENYQVWIEFREFEINVTMAPAGKRKPNRPLISKPINFSRVFVDEMYVGFSGSTGRMVDTCRILAWSFSHSNFSIGDALNTKNLPTYVNPKKFIYKSKAFVISVIFGSLLVFGCCILVFFILLRKKKEEKEEEFEDWELEYWPHKISYKEICDATSGFSEENVIGIGTSGKVYKGVLKGGDEVAVKRFNHDTQHGMRGFLAEISSLGRLKHRNLLGFKGWSKEKRGKLILVFDYMENESLDKRIFECEETKLLNWEERIRVLENVASGILYLHEGWDFEVLHRDIKASNVLLGKDMNARIGDFGLARLQHQERVADTTSVIGTLGYMAPELVKVGKPSTATDVYSFGILVLEVVCGRRPIVTDEPPLVELVFSLMEKGELSSAIDERLKGQMECKYNTVVAERLLHLGLLCASVDPGVRPTMRQVVKALEGVKCTECNEECVHVSLIGKINLAASWSKNSYDSARLNSPTLADILPFKYFSGDCLSVSYASMEPLSDSLSEGR* 693
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr2g3098 692 SUPERFAMILY Protein kinase-like (PK-like) 325 619 IPR011009 -
Mtr2g3098 692 PANTHER - 3 668 - -
Mtr2g3098 692 Pfam Legume lectin domain 21 261 IPR001220 GO:0030246
Mtr2g3098 692 Gene3D Phosphorylase Kinase; domain 1 309 423 - -
Mtr2g3098 692 SUPERFAMILY Concanavalin A-like lectins/glucanases 19 262 IPR013320 -
Mtr2g3098 692 ProSitePatterns Serine/Threonine protein kinases active-site signature. 469 481 IPR008271 GO:0004672|GO:0006468
Mtr2g3098 692 SMART serkin_6 347 618 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr2g3098 692 ProSiteProfiles Protein kinase domain profile. 347 635 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr2g3098 692 ProSitePatterns Protein kinases ATP-binding region signature. 353 375 IPR017441 GO:0005524
Mtr2g3098 692 Pfam Protein kinase domain 348 616 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr2g3098 692 Gene3D - 19 272 - -
Mtr2g3098 692 Gene3D Transferase(Phosphotransferase) domain 1 424 636 - -
Mtr2g3098 692 CDD lectin_legume_LecRK_Arcelin_ConA 22 258 IPR001220 GO:0030246
Mtr2g3098 692 PANTHER LECTIN RECEPTOR KINASE 3 668 - -
Mtr2g3098 692 Coils Coil 309 329 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr2g3098 Mtr-Chr2 44662530 44664943 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr2g3098 18 570 Receptor kinase-like Gene Family AT4G04960 53.667 0.0 564
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Mtr2g3098 Pkinase 2.9e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr2g3098 - - mtr:MTR_2g090410 1351.65