Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr2g3097 ATGAATAATAATGTTATGCTTCAAGCCTTCAACCAATTTCAATTTAGCAAAAGTTTCTGTCATATTAATCCATTGACAATGCCTCAACTTAAGCTCCTTATCACTCTTCTTCACACTGTAACCATAATTATATGTTGTGTTTCCACTACTGAATTTGTCTATAATACAAACTTCAACTCCACAAACATCATCCTATATGGAAATGCCACCATTCAGACCTCTATTCTCACTCTCACTAATGGTAGTTTCTTCTCCATAGGCCGTGCTTTTTACCCTAAAAAAATACCTATCAAACCACCCAACTCTTCCACCATTCTCCCCTTTGCAACCTCCTTCATTTTCTCTGTTGCCCCCATCAAAAACTCTATTGCAGGACATGCCTTCTCCTTCCTATTCACATCTTCAAGAGATGTAAATGGCACAACATCAGCTGAGTATATGGGCCTCTTCAATCTCACCAATGAAGGTAATCCTAACAACCATGTTCTTGCAGTTGAATTCGATATAGCTAAAAACGTAGAAGAGTTCAACGATATAAATGACAATCATGTTGGTGTTGACATAAACTCACTTACATCCTTAACTTCACATGAGGCTGGCTACTGGGGTGGAAAATATGACAATGAATTTAAGGTGTTGAAGATAAAAAGCGGAGAAAATTATCAAGTATGGATCGAGTTTATGCACTCCCAGCTAAATGTTACAATGGCTCTGGCAGGACAAAAGAGGCCCCATGTTCCTCTCATCAGTACAAATGTTGATCTTTCCGGGGTTCTTATGGATGAAACATATGTTGGATTCTGCGCATCCACAGGGCGATTAATAGACAGTAGTAAGATTCTTGCTTGGAGCTTTAGTAACACAAATTTTTCAATTGGTGATGCTTTAGTGACAGATAACTTACCTTCATTTGTCCCTCATAAGGGATGGTTTTCTGGAGCAAAAGCTATAGCTGTAGGAGTCACTACTGTTGTCTGTGTGTTAATCATCGGTTTTGGTTGTGTAGTGTTTTTCATCCGATATATAAGACAAAAGGGAGAGGAAGAAATTGAAGAGTGGGAACTAGAGTACTGGCCACATAGAATTAGTTTCCAAGAGATTCACGCAGCAACAAGAGGGTTCTCTGAAGAGAATGTGGTAGCTGTAGGAGGTAATGGAAAGGTATATAAAGGGATTTTGCAAGGAGTTGAAGTTGCGGTCAAGAGAATCCCTCAAGAAAGAGAAGACGGAATGAGAGTGTTTTTGGCAGAGGTTTCAAGCATAGGAAGAATGAAACACAGAAATTTAGTAGGGTTGAGAGGTTGGTGCAAAAAAGATAAAGGAAACTTGATTCTAGTGTACGACTTCATGAATAATGGAAGTTTGGACAAATGGATATTTGAGTGTGAAAAAGGAAAGATGCTAACATGGGAAGAGAGGATTCAAGTTTTGAAAAGCGTAGCCGCGGGGATTCTTTACCTGCATGAAGGTTGGGAAGTTAAGGTCTTGCATAGGGATATCAAAGCAAACAATGTTCTACTTGACAAGGACATGAATGCTAGATTGGGGGATTTTGGTTTGGCTCTTATGCATGAGCATCATGGACAAGTTGCCAACACAACAAAAGTATTAGGGACATTAGGATACATTGCTCCGGAAGTGATTCGAACAGGAAAAGCATCGACTATGTCTGATGTGTTTGGCTTTGGAATATTGGTGTTGGAAGTAATCTGCGGGCGAAGACCTATTGAAGAACATAAGCCAGGGCTAATTGAATGGGTGGAGTCTCTAATGGTGCTTGATCAATTGGACAATGCTGTTGATGAAAGGTTGGAGACGGAAGGAGGATACTCCATCGAAGAAGCTGTGAGATGGCTTCATTTGGGTTTGTTGTGTACAAGTTCAGACCCTAACGTTAGACCAATGATGAGGCAGGTTCTGAAAATGTTGGGGGGAGAAATTGACAACATTGAGTGTGATGGTGAAAATATGGAGACAAGTTTGCTTAGAAGAATACAATCAGCTGCAACATGGTCTAGAACTGATCCGTGCAGAGGTCATCCTACCTTTGAAGAAATTAGAATGATCAGTTATAATTCAAAGACCTCAAGTGATATCATTTGGGAAGGTAGATAA 2115 0.3986 MNNNVMLQAFNQFQFSKSFCHINPLTMPQLKLLITLLHTVTIIICCVSTTEFVYNTNFNSTNIILYGNATIQTSILTLTNGSFFSIGRAFYPKKIPIKPPNSSTILPFATSFIFSVAPIKNSIAGHAFSFLFTSSRDVNGTTSAEYMGLFNLTNEGNPNNHVLAVEFDIAKNVEEFNDINDNHVGVDINSLTSLTSHEAGYWGGKYDNEFKVLKIKSGENYQVWIEFMHSQLNVTMALAGQKRPHVPLISTNVDLSGVLMDETYVGFCASTGRLIDSSKILAWSFSNTNFSIGDALVTDNLPSFVPHKGWFSGAKAIAVGVTTVVCVLIIGFGCVVFFIRYIRQKGEEEIEEWELEYWPHRISFQEIHAATRGFSEENVVAVGGNGKVYKGILQGVEVAVKRIPQEREDGMRVFLAEVSSIGRMKHRNLVGLRGWCKKDKGNLILVYDFMNNGSLDKWIFECEKGKMLTWEERIQVLKSVAAGILYLHEGWEVKVLHRDIKANNVLLDKDMNARLGDFGLALMHEHHGQVANTTKVLGTLGYIAPEVIRTGKASTMSDVFGFGILVLEVICGRRPIEEHKPGLIEWVESLMVLDQLDNAVDERLETEGGYSIEEAVRWLHLGLLCTSSDPNVRPMMRQVLKMLGGEIDNIECDGENMETSLLRRIQSAATWSRTDPCRGHPTFEEIRMISYNSKTSSDIIWEGR* 705
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr2g3097 704 PANTHER - 27 699 - -
Mtr2g3097 704 ProSiteProfiles Protein kinase domain profile. 374 647 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr2g3097 704 ProSitePatterns Serine/Threonine protein kinases active-site signature. 495 507 IPR008271 GO:0004672|GO:0006468
Mtr2g3097 704 Gene3D Phosphorylase Kinase; domain 1 338 449 - -
Mtr2g3097 704 CDD lectin_legume_LecRK_Arcelin_ConA 50 288 IPR001220 GO:0030246
Mtr2g3097 704 PANTHER LECTIN RECEPTOR KINASE 27 699 - -
Mtr2g3097 704 CDD STKc_IRAK 383 643 - -
Mtr2g3097 704 SUPERFAMILY Concanavalin A-like lectins/glucanases 50 288 IPR013320 -
Mtr2g3097 704 Pfam Protein kinase domain 378 641 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr2g3097 704 Gene3D Transferase(Phosphotransferase) domain 1 450 661 - -
Mtr2g3097 704 Gene3D - 48 293 - -
Mtr2g3097 704 SMART serkin_6 374 643 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr2g3097 704 SUPERFAMILY Protein kinase-like (PK-like) 351 643 IPR011009 -
Mtr2g3097 704 Pfam Legume lectin domain 50 289 IPR001220 GO:0030246
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr2g3097 Mtr-Chr2 44658531 44661757 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr2g3097 47 591 Receptor kinase-like Gene Family AT4G04960 56.962 0.0 605
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Mtr2g3097 Pkinase 4.9e-43 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr2g3097 - - mtr:MTR_2g090410 1370.91