Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr2g3096 ATGGGTTGCATAAATTCCAAGACTTCAGCTGTGGATGACAGTAAGGTAGGTTTGACAAAGGATTTGGCGTCATCTAGCAAAAGGAATTTTGTGAAGAATGTTTCGAGATCGGATACGAAGAAAAGGGTTGATGGAGTTTTGGAGAAAGATAAGTTATTGGATGGTATTGGCAGTATGAAAGTTTCATTGATTGAGAAGGAAGCGGATAATGGGCCGGTGAGGTTGTATGATGATCATAATGAGAAGAAAACAAGGAAAATGGAGAAACCTGAATTGGCTGCTGTTGTTGATAATCCGAGTCTTGGAGGAAGGGTTCCAAAGGCTTTAGAAGGCGAGCAAGTTGCAGCAGGATGGCCAACTTGGCTTTCTTCTGTTGCTGGTGAAGCTATCAATGGGTGGTTGCCGCGGAGTGCAAGTACTTTTGAGAAGTATGATAAAATTGGCCAAGGAACTTACAGCACTGTTTTTAAGGCACGTGATTTGATTAGCCAAAAGGTGGTTGCCTTGAAGCGGGTGCGTTTTGATAATCTTGATCATGAGAGTGTCAAGTTCATGGCAAGGGAAATCATTTTTCTGCGTAGGCTTGACCATCCAAATGTAATAAAGTTGGAGGGATTGATAACATCGAAGAATTCTCGCAGCTTGTACCTTGTTTTTGAATACATGGAACATGATCTTACAGGACTTGTATCAGCACCTGGTATCAAATTTTCTGAACCACAGATTAAATGCTACATGAAGCAGCTTCTTAGTGGATTGGATCATTGCCATAGTCGTGGTATCCTCCACCGTGATATAAAGGGCTCAAATCTTCTCATTGACAATAAGGGCATTTTAAAGATTGCAGATTTCGGTTTGGCAAATTTTTTTGACCCCAATCGAAGTGCTCCATTGACCAGCCGCGTAGTAACTTTATGGTATAGACCACCAGAACTTTTACTTGGATCATCAAATTATGGAGTTGCAGTGGATATGTGGAGCACTGGTTGCATACTCGGCGAACTCTACTGCGGCAGGCCTATATTGCCTGGAAAAACAGAGGTTGAGCAATTGCATAGGATTTTTAAACTTTGTGGATCACCATCTGTAGACTATTGGCGTAAACTGCGGCTGCCCCATTCTACAGCGTTCAGGCCTCCACACCATTATAGGAATTGTGTTAAAGATACATTTAAAGAAGTTCCATCTGCTGCTGTAAGGCTTATGGAGACCCTACTCTCTTTAGATCCTAGACTTCGAGGAACCGCAGCTACAGCTCTGAAGAACGAGTTCTTTTCAGCGGAACCCGTTGCTTGTGATCCATCAACTTTGCCAAAATATCCTCCCACCAAAGAGATTGACGCTAAAATGCGGGAAGAATCGACAAGAAAGGAAGGAGCTCTTGGGGGGAAGGAACAAAAAGTTGGGTCACGAGTTAGACAAGAGAAAGAACCTCAGTCATTTGTCTTACCCAAAGCCAATGCTGTATCTCACATATCAATGCAGCAAGGGCAGCACTTTCCAAACATGACAAGCCGGAATGAATCATTCAACCCTCACAGAGAGCCTGCATCTGGATTTATGGTTTTGCCACACAAACAGTCGGAAGATGTTAAAGAAACGGCTAATTATTTCTCTGGGCCTCTTTATCCGAGGTCTTCACATTCAGGTTTACTGGTTCCAGGTTCCGGCCGGCACAAAATTGGAAAAGAAGCCAGTGAGCGGCCGCTTCCTGTTTCAACTAAAGCCAACCTATCGAAACCATCTAGGACTTCGTTCTCCGGAAACCAAAAAGAAAATCCAGCTCCTTGGAGGCCCCAAGATACAATTCAAGTACAAAAGTCTTTTGGGTTGAGTAGTGGATCAGAGTCAAGAAAGCGGCATGATAAAAAACGCCATTCAAAGATAGCCGATCTCAGCCAAACAGAAAATGGAAAGGATGGGAATGTATCCAGTGGAAACAATCTATATATGTCTGGTCCATTACTGGTTTCGTCAAACAATATGGATCAGATGCTCAAAGAGCGTGATAAGAAGTTGCAAGAATATTCAAGACGAGCCAGAATTAAATAG 2052 0.4293 MGCINSKTSAVDDSKVGLTKDLASSSKRNFVKNVSRSDTKKRVDGVLEKDKLLDGIGSMKVSLIEKEADNGPVRLYDDHNEKKTRKMEKPELAAVVDNPSLGGRVPKALEGEQVAAGWPTWLSSVAGEAINGWLPRSASTFEKYDKIGQGTYSTVFKARDLISQKVVALKRVRFDNLDHESVKFMAREIIFLRRLDHPNVIKLEGLITSKNSRSLYLVFEYMEHDLTGLVSAPGIKFSEPQIKCYMKQLLSGLDHCHSRGILHRDIKGSNLLIDNKGILKIADFGLANFFDPNRSAPLTSRVVTLWYRPPELLLGSSNYGVAVDMWSTGCILGELYCGRPILPGKTEVEQLHRIFKLCGSPSVDYWRKLRLPHSTAFRPPHHYRNCVKDTFKEVPSAAVRLMETLLSLDPRLRGTAATALKNEFFSAEPVACDPSTLPKYPPTKEIDAKMREESTRKEGALGGKEQKVGSRVRQEKEPQSFVLPKANAVSHISMQQGQHFPNMTSRNESFNPHREPASGFMVLPHKQSEDVKETANYFSGPLYPRSSHSGLLVPGSGRHKIGKEASERPLPVSTKANLSKPSRTSFSGNQKENPAPWRPQDTIQVQKSFGLSSGSESRKRHDKKRHSKIADLSQTENGKDGNVSSGNNLYMSGPLLVSSNNMDQMLKERDKKLQEYSRRARIK* 684
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr2g3096 683 SUPERFAMILY Protein kinase-like (PK-like) 136 429 IPR011009 -
Mtr2g3096 683 MobiDBLite consensus disorder prediction 541 683 - -
Mtr2g3096 683 MobiDBLite consensus disorder prediction 452 478 - -
Mtr2g3096 683 Gene3D Phosphorylase Kinase; domain 1 128 223 - -
Mtr2g3096 683 PANTHER CYCLIN-DEPENDENT KINASE 1 680 - -
Mtr2g3096 683 MobiDBLite consensus disorder prediction 452 474 - -
Mtr2g3096 683 MobiDBLite consensus disorder prediction 634 663 - -
Mtr2g3096 683 ProSiteProfiles Protein kinase domain profile. 141 425 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr2g3096 683 ProSitePatterns Protein kinases ATP-binding region signature. 147 170 IPR017441 GO:0005524
Mtr2g3096 683 ProSitePatterns Serine/Threonine protein kinases active-site signature. 261 273 IPR008271 GO:0004672|GO:0006468
Mtr2g3096 683 Gene3D Transferase(Phosphotransferase) domain 1 224 462 - -
Mtr2g3096 683 CDD STKc_CDK9_like 141 425 - -
Mtr2g3096 683 MobiDBLite consensus disorder prediction 664 683 - -
Mtr2g3096 683 MobiDBLite consensus disorder prediction 572 613 - -
Mtr2g3096 683 Pfam Protein kinase domain 141 425 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr2g3096 683 SMART serkin_6 141 425 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr2g3096 683 PANTHER CELL DIVISION PROTEIN KINASE 1 680 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr2g3096 Mtr-Chr2 44653152 44657885 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr2g3096 133 457 Core Cell Cycle Gene Families AT5G10270 47.507 6.96e-107 332
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_CDK-CRK7-CDK9 Mtr2g3096 Pkinase 3.5e-67 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr2g3096 - K08819 gmx:100775462 970.689
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr2g3096 2 44653152 44657885 Mtr2g3096 2 44653152 44657885 ECH
Mtr2g3096 2 44653152 44657885 Mtr4g2453 4 38129947 38134538 PCT