Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr2g3078 ATGCCTCAACTTAAGCTACTTTTCACTCTTCTTTACACTTTAACCATTTTGAGTTATGTTTCCACTACTGAATTTGTCTATAATACAAACTTCAACTCCAAAAACATTATCCTATATGGAAATGCAACCATTAACAAATCCATTCTCACTCTGACTAATGACACTTCTACTTCCTTCTCAATAGCTCGTGCTTTTTACCCTAAAAAAATACCTACAAAACCATCAAACTCTTCCACTCTTCTCCCATTTGCTACTTCCTTCATTTTCTCTGTCTCCCCCATCAAAAACTTTATCACAGGACATGGCTTTGCCTTCATATTCACACCTTCAAGTGGTCTAAATGGAACAACATCAACCGAGTATATCGGTTTTTTAAATCTTACAAATCAAGGTAATCCTAACGACCATGTTTTTGGAGTCGAATTCGATATAGTTAGAAACGAAGAATTCAATGATACTGATGATAATCATGTTGGTATCGACGTAAACTCTCTAACATCCGTATCTTCACATGAGGCTGGCTATTGGGGTGGGAAACATGACAAGAAGTTTAATGTGTTGAACATGAACAGTGGAGAAAATTATCAAGTATGGATTGAGTTTATGCACTCTCAGATAAACGTTACGATGGCTCGGGCAGGACAAAAGAGGCCACGTGTGCCTCTTATCAGCATGAATCTTAACCTTTCTGGAGTTCTTAGGGATGAAACTTATGTTGGATTCTGTGCAGCCACGGGGAAGAAAAGAGATAGTGTTAAGATTCTTGCTTGGAGCTTTAGTAATACAAATTTTTCAATTGGTGATGCTTTAGTAACACACAACTTGCCTTCATTTGTCCCTCATAAAGGATGGTTTTTCGGAGCAAAGGCTATAGATGTAGGAATAACCAGTGTTGTCTGTGTCTTAATCATTGGTTGTGCAGTGTTATTCATTCGCCATATGAGAAACAAAGGAGAAGAAGAAATTGAAGATTGGGAATTAGAGTATTGGCCACATAGGATTAGTTTCCAAGAGATTCATGCAGCAACAGGAGGATTCTCTGAAGAGAATGCGGTTGCTGTAGGAGGGAACAAAAGTATATATAAAGGGATTTTGCAAGGCGTTGAAGTCGCTGTCAAGATAATCCCTCAAGAGAGAGAAGGGATGAGAGAGTTTTTGGCCGAGGTTTCAAGCCTAGGAAGACTGAAACATAGAAATTTAGTAGGATTCAGAGGTTGGTGCAAGGAAGAAAAGGGAAACTTGATTCTAGTTTATGACTTCATGACTAATGGAAGTTTAGACAAATGGATCTTTGAGTGTGAAGAAGGAAAGATGCTAACATGGGAAGAGAGGATTCAAGTTTTGAAAAATGTAGCCACAGGGATTCTATACCTGCATGAAGGTTGGGAAGTCAAGGTTTTGCATAGGGATATCAAAGCAAGCAATGTTCTACTTGACAAGGATATGAATGCTAGATTGGGGGATTTTGGTTTGGCTCTCATGCATGAGCATCACGGACAAGTGGCCAGCACAACAAAAGTACTCGGAACATTAGGATACATTGCTCCAGAAGTGATTCGAACAGGAAGAGCATCAACTATGTCTGATGTGTTTGGGTTTGGAATATTGGTGTTGGAAGTGATTTGCGGCCGAAGACCTATTGATGAACATAAGCCAGGGCTAATCGAATGGATGGAGTCCCTAATGGTGCTTGATCAACTTCACAGTGCTGTTGATGAAAGGTTGAAGGCTAAGGGAGGATACACCATTGAGGAAGCTGAGAGATTGCTTCATTTGGGTTTACAGTGTTCAAATTCAGACCCTAGTGTTAGACCAGTAATGAGACAGGTTGTGAAAATGTTAGAGGGAGAAATGGAAAGCATTGAATCTGATGAAGAAAATACAGAGAAAAGTTTACTTGGAAGAATAAAATCAGCTGCAATGTGGTCTAGAACTGAAAGTACACTTCCATATAGAGATCACCCTACTTTTGAAGAAATTAGAATGTTCAGTTATAATTCTAAGACATCTACAAGTGGCTCAAGTTCAATTTTACCGTCGGATTCAGATATCATTCGGGAAGGCCGGTAA 2070 0.3923 MPQLKLLFTLLYTLTILSYVSTTEFVYNTNFNSKNIILYGNATINKSILTLTNDTSTSFSIARAFYPKKIPTKPSNSSTLLPFATSFIFSVSPIKNFITGHGFAFIFTPSSGLNGTTSTEYIGFLNLTNQGNPNDHVFGVEFDIVRNEEFNDTDDNHVGIDVNSLTSVSSHEAGYWGGKHDKKFNVLNMNSGENYQVWIEFMHSQINVTMARAGQKRPRVPLISMNLNLSGVLRDETYVGFCAATGKKRDSVKILAWSFSNTNFSIGDALVTHNLPSFVPHKGWFFGAKAIDVGITSVVCVLIIGCAVLFIRHMRNKGEEEIEDWELEYWPHRISFQEIHAATGGFSEENAVAVGGNKSIYKGILQGVEVAVKIIPQEREGMREFLAEVSSLGRLKHRNLVGFRGWCKEEKGNLILVYDFMTNGSLDKWIFECEEGKMLTWEERIQVLKNVATGILYLHEGWEVKVLHRDIKASNVLLDKDMNARLGDFGLALMHEHHGQVASTTKVLGTLGYIAPEVIRTGRASTMSDVFGFGILVLEVICGRRPIDEHKPGLIEWMESLMVLDQLHSAVDERLKAKGGYTIEEAERLLHLGLQCSNSDPSVRPVMRQVVKMLEGEMESIESDEENTEKSLLGRIKSAAMWSRTESTLPYRDHPTFEEIRMFSYNSKTSTSGSSSILPSDSDIIREGR* 690
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr2g3078 689 SMART serkin_6 346 614 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr2g3078 689 PANTHER LECTIN RECEPTOR KINASE 1 677 - -
Mtr2g3078 689 CDD STKc_IRAK 355 616 - -
Mtr2g3078 689 CDD lectin_legume_LecRK_Arcelin_ConA 23 262 IPR001220 GO:0030246
Mtr2g3078 689 MobiDBLite consensus disorder prediction 667 681 - -
Mtr2g3078 689 Gene3D Phosphorylase Kinase; domain 1 308 420 - -
Mtr2g3078 689 Gene3D - 21 267 - -
Mtr2g3078 689 Pfam Protein kinase domain 354 612 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr2g3078 689 Gene3D Transferase(Phosphotransferase) domain 1 421 639 - -
Mtr2g3078 689 Coils Coil 611 631 - -
Mtr2g3078 689 ProSiteProfiles Protein kinase domain profile. 346 621 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr2g3078 689 Pfam Legume lectin domain 23 263 IPR001220 GO:0030246
Mtr2g3078 689 PANTHER - 1 677 - -
Mtr2g3078 689 SUPERFAMILY Protein kinase-like (PK-like) 322 615 IPR011009 -
Mtr2g3078 689 MobiDBLite consensus disorder prediction 667 689 - -
Mtr2g3078 689 SUPERFAMILY Concanavalin A-like lectins/glucanases 23 262 IPR013320 -
Mtr2g3078 689 ProSitePatterns Serine/Threonine protein kinases active-site signature. 466 478 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr2g3078 Mtr-Chr2 44461196 44463556 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr2g3078 20 562 Receptor kinase-like Gene Family AT4G04960 55.893 0.0 592
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Mtr2g3078 Pkinase 3.4e-41 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr2g3078 - - mtr:MTR_2g090410 1051.97