Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr2g3075 ATGGCTGCAGCTAAGAACAGTGGCAAATTCAACAAAGATTTTGGTGATGAAACTCATAACAATCACAACAAGGTTACCAAGATTGGTGAAAGCCAAGTTAATTGGGAGATTGAAAAAGGAAAAAGTGTTGAAATAAGCTCTTCTCAAAGACATCATTGGAAGCCAGTTTTTGATGAAGCTTCTAATATGTCACATAATAGACCTTACAAGAAAAGCAAAAGTCCTCAACGTGAAAATCAAAACCAAAACCAAAACCAATTTCAACCTTTCTCTTTTCCTTCTTCAGCTTCTTCTTCTTCAAGGCATGTTTTTCCTTTTGCTTTTGATCATAATTCAGAACAATTTCCTCAACAATTTGGTCCCAACAACAATTTACCTTTTCACCCTCCAACACAAAACCAACAACAAATGATATCTTTTGGTACACAGTCACAACAACAGACCAATATTGTTCCATATCCACCAATGTTGTCTCAACAGCAACATCAACAACAGATTCTTCAATATTGGAGTGATGCATTGAATCTTAGTCCAAGAGGAAGAATGTTGATGATGATGAACAACAATAACAATAGGTATTTGGGGCAATATAGTAATAATAATGGACCAATGTTTAGGCCTCAAATTCAACCTATAAGCACTACAAAACTCTATAGAGGAGTTAGACAAAGACATTGGGGAAAATGGGTTGCTGAAATTCGTCTACCTCGAAACAGAACTCGTTTGTGGTTAGGAACATTTGATACTGCAGAAGATGCTGCTTTAGCCTATGATCGCGAAGCATTTAAGTTAAGAGGTGAGAATGCAAGGCTCAATTTTCCTGATCTTTTTCTCAATAAAGGAAAAGAAAAAGAAAATGAAAAAGAAGAAGAACCTTCATCACCGCCTCCAACAGAAACAACAATTTCGCCTGTTACTTCTCCTTCAAGTAACACCGCGACAAAGCAGCCTGAACCTCCTCCGATGCAGACACTTCCAATGGAAGAGTCTAATGAGAATGACTCCGGAATTGGATCAAGTGACGCGACAGTGAGTGAAGGCGGAGAAGGAGTTTCAGTTTCGCAGTCTCAAGAATTGGTTTGGAGTGAAATGTCAGCATGGTTTAATGCTATTCCAGCTGCTTGGGGACCAGGTAGTCCTGTTTGGGACGATAATCTATTTTCGCAGTCACAAAATCCGTTTTCCAATCTAAATCAACAATCAGAATTCAATGATTTTGATTCTCATACGGAGTCAGGTTCTTCCATTAGGCCTTTCTTCTGGAATAATGATCAAAATTAA 1281 0.381 MAAAKNSGKFNKDFGDETHNNHNKVTKIGESQVNWEIEKGKSVEISSSQRHHWKPVFDEASNMSHNRPYKKSKSPQRENQNQNQNQFQPFSFPSSASSSSRHVFPFAFDHNSEQFPQQFGPNNNLPFHPPTQNQQQMISFGTQSQQQTNIVPYPPMLSQQQHQQQILQYWSDALNLSPRGRMLMMMNNNNNRYLGQYSNNNGPMFRPQIQPISTTKLYRGVRQRHWGKWVAEIRLPRNRTRLWLGTFDTAEDAALAYDREAFKLRGENARLNFPDLFLNKGKEKENEKEEEPSSPPPTETTISPVTSPSSNTATKQPEPPPMQTLPMEESNENDSGIGSSDATVSEGGEGVSVSQSQELVWSEMSAWFNAIPAAWGPGSPVWDDNLFSQSQNPFSNLNQQSEFNDFDSHTESGSSIRPFFWNNDQN* 427
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr2g3075 426 MobiDBLite consensus disorder prediction 57 96 - -
Mtr2g3075 426 MobiDBLite consensus disorder prediction 303 318 - -
Mtr2g3075 426 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF053 1 421 - -
Mtr2g3075 426 MobiDBLite consensus disorder prediction 75 96 - -
Mtr2g3075 426 Pfam AP2 domain 218 266 IPR001471 GO:0003700|GO:0006355
Mtr2g3075 426 Gene3D AP2/ERF domain 217 275 IPR036955 GO:0003700|GO:0006355
Mtr2g3075 426 PRINTS Ethylene responsive element binding protein signature 218 229 IPR001471 GO:0003700|GO:0006355
Mtr2g3075 426 PRINTS Ethylene responsive element binding protein signature 240 256 IPR001471 GO:0003700|GO:0006355
Mtr2g3075 426 MobiDBLite consensus disorder prediction 277 294 - -
Mtr2g3075 426 CDD AP2 216 276 IPR001471 GO:0003700|GO:0006355
Mtr2g3075 426 MobiDBLite consensus disorder prediction 326 356 - -
Mtr2g3075 426 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF061 1 421 - -
Mtr2g3075 426 MobiDBLite consensus disorder prediction 277 356 - -
Mtr2g3075 426 MobiDBLite consensus disorder prediction 392 426 - -
Mtr2g3075 426 MobiDBLite consensus disorder prediction 1 32 - -
Mtr2g3075 426 ProSiteProfiles AP2/ERF domain profile. 217 274 IPR001471 GO:0003700|GO:0006355
Mtr2g3075 426 SUPERFAMILY DNA-binding domain 217 275 IPR016177 GO:0003677
Mtr2g3075 426 SMART rav1_2 217 280 IPR001471 GO:0003700|GO:0006355
Mtr2g3075 426 MobiDBLite consensus disorder prediction 10 24 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr2g3075 Mtr-Chr2 44445681 44447828 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr2g3075 126 387 AP2-EREBP Transcription Factor Family AT2G20880 51.527 4.20e-62 202
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Mtr2g3075 AP2 3.1e-13 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr2g3075 - - gmx:100809887 377.481
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr2g3075 2 44445681 44447828 Mtr2g3075 2 44445681 44447828 ECH