Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr2g3063 ATGTTAGAGATGAGATCTAGTTCACTGTACAAGAGAATGAAATTGAAAACTGATATACAAAAAGTTGTATTTGTATTGGTGTTGATCTGTATAGTTCAGTTTTCATTTGCAGCTACTAATCCCACTGATGTTGCTGCAATTAATAGATTATATGCTGCATTGGGCAACCCTGTTCTTCCTGGGTGGGTTGCTAGTGCGGGAGACCCGTGCGGAGAAGCGTGGCAAGGCGTTCAATGTAATGATTCACTCATACAAGAAATAACTCTGATTGGTGCAAATTTGGGAGGAGTATTGGGTGATAGCTTGGGGCCGTTTGTTTCTATCAAATCAATATCTCTAAGCAACAACCACATTGGAGGAAGTATTCCATCAAGTTTACCTGCCACGTTGCAATCCCTTTTTCTTTCAGGTAACCAGTTCACCGGAAGTATTCCAGTCTCTTTATCCACATTGACAGAACTGACTGCCATGTCTCTTGATAATAATCTGTTAACTGGAGAAATACCAGATGCCTTTCAGTCTCTAACGCGATTGACCAATCTAGATTTATCTCATAACAATTTGAGCGGGGAATTGCCTCCATCTGTAGAGAATTTGTCAGCTGTGACCACCTTAAATTTACAGAATAATAACCTGTCTGGGACACTCGATGTTTTGCAAGACCTTCCACTGACAGATTTGAATGTTGAGAACAACCAGTTTTCTGGACCAATACCTCAAAAGTTGTTAACCATTACCAACTTCAGAAAAGATGGAAACCAATTTGACCTCAATAGTAATGTTACTATTGCACCAACTCGCCCACCTCATTCTCCGGTAACAGCATCTCCGGTAACAACATCACCATCAGGAACTGTAGTTTCTGGGACACCATCTTCTGGACGTGTACCAACTAAACAGGCCGGTGGACCAACTGCATCAAAGGATTCAAGTTCCGGGAAATCGAAAAAAAATACCAAAAGAGTGGTTTGGATAAGTATTTCTGGTGTATTGGGGTTTATCATCTTGGTACTGGCACTTCTTCTCTTTCTTCCAAGATGTAGCAAAAGGGAACGGGTCGGCAGAACTTCTAAGCAACATCAGATTGGAGCATATGGAGGCGAAAGAACGAATCCTTGGAATAATGGGGCTCTAGTCCAACCACCTAGTCAAACTGAGAAAGTACCAAAAGCGGCTGTTGTAAGGCCAAAGGAGAATCATCAAGCAGAGAAAAATGTACAAAGAATGGAAGCATTGCCAAAGCTATTAAGTCATGACATAGATATGAGTGGACTAGATGTAGATTCAATGCCACCTCCACCTCCACCTCCTCCTCCACCTCCTGCTCCACCACTTGCTGCGGAGAAGGTGATCGTCGAGCCAACCACATTCCCCGGAGGGTCCAACATTAATCCTTCCAAAAGTAGCCTGGTTCCTCCGACATTTGCAAAATCGTTCACCATTGCAGCCCTTCAACAGTATACAAATAGCTTTTCTCAAGACAATCTTATAGGATTAGGCATGTTGGGGAGTGTATATAGGGCAGAGCTTCCTAATGGGAAGATACTTGCTGTGAAGAAGCTAGACAAGAAAGTTTCTGATCAAGATGATGCTGAGTTTATTGAACTGGTTAATAATATTGACAGAATTCGGCATGCAAATATTGTTGAGCTTATTGGTTACTGTCTAGAGCATGGACAGAGGCTTCTAATCTATGAATACTGCAATAACGGGTCAATGTATGAAGCACTTCATTCAGATGATGAATTCAAAACAAGACTTTCTTGGAATGCTCGTATTCGGATAGCACTTGGGGCTGCCAGAGCATTAGAGTACTTGCATGAGCAATGTCAGCCACCTGTTATACACAGAAATTTCAAGTCTGCTAACATTCTCCTTGATGAAGATCTATCTGTGCGTGTATCTGATTGTGGTTTGGCTCCATTAATAACTAAAGGTTCTGTACGTCAGCTCTCAGGACAGCTGCTAGCAGCTTACGGCTACGGGGCTCCAGAATTTGAGTCAGGAATTTACACCTATCAGAGTGACGTTTACAGCTTTGGAGTCGTTATGTTGGAACTTTTGACAGGCCGTCAGTCCTATGACAAAAAACGTCCTCGAGGTGAGCAGTTTCTTGTGAGATGGGCAATTACTCAACTTCATGACATTGATGCGTTATCAAGGATGGTTGATCCTTCTCTAAATGGAGCTTACCCTGCCAAATCATTGTCAAATTTTGCAGACATTATTTCTAGATGTGTTCAGTCTGAGCCAGAATTTCGACCAGCGATGTCAGAGGTTGTTTTGTACTTGCTAAATATGATAAGGAGGGATTCTCAACAAAATGAATAA 2331 0.4204 MLEMRSSSLYKRMKLKTDIQKVVFVLVLICIVQFSFAATNPTDVAAINRLYAALGNPVLPGWVASAGDPCGEAWQGVQCNDSLIQEITLIGANLGGVLGDSLGPFVSIKSISLSNNHIGGSIPSSLPATLQSLFLSGNQFTGSIPVSLSTLTELTAMSLDNNLLTGEIPDAFQSLTRLTNLDLSHNNLSGELPPSVENLSAVTTLNLQNNNLSGTLDVLQDLPLTDLNVENNQFSGPIPQKLLTITNFRKDGNQFDLNSNVTIAPTRPPHSPVTASPVTTSPSGTVVSGTPSSGRVPTKQAGGPTASKDSSSGKSKKNTKRVVWISISGVLGFIILVLALLLFLPRCSKRERVGRTSKQHQIGAYGGERTNPWNNGALVQPPSQTEKVPKAAVVRPKENHQAEKNVQRMEALPKLLSHDIDMSGLDVDSMPPPPPPPPPPPAPPLAAEKVIVEPTTFPGGSNINPSKSSLVPPTFAKSFTIAALQQYTNSFSQDNLIGLGMLGSVYRAELPNGKILAVKKLDKKVSDQDDAEFIELVNNIDRIRHANIVELIGYCLEHGQRLLIYEYCNNGSMYEALHSDDEFKTRLSWNARIRIALGAARALEYLHEQCQPPVIHRNFKSANILLDEDLSVRVSDCGLAPLITKGSVRQLSGQLLAAYGYGAPEFESGIYTYQSDVYSFGVVMLELLTGRQSYDKKRPRGEQFLVRWAITQLHDIDALSRMVDPSLNGAYPAKSLSNFADIISRCVQSEPEFRPAMSEVVLYLLNMIRRDSQQNE* 777
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr2g3063 776 Gene3D Ribonuclease Inhibitor 40 266 IPR032675 -
Mtr2g3063 776 Pfam Leucine rich repeat N-terminal domain 41 80 IPR013210 -
Mtr2g3063 776 PANTHER PROTEIN STRUBBELIG-RECEPTOR FAMILY 1-RELATED 27 776 - -
Mtr2g3063 776 MobiDBLite consensus disorder prediction 426 445 - -
Mtr2g3063 776 MobiDBLite consensus disorder prediction 379 402 - -
Mtr2g3063 776 ProSiteProfiles Protein kinase domain profile. 491 764 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr2g3063 776 MobiDBLite consensus disorder prediction 428 445 - -
Mtr2g3063 776 Gene3D Phosphorylase Kinase; domain 1 462 567 - -
Mtr2g3063 776 MobiDBLite consensus disorder prediction 259 318 - -
Mtr2g3063 776 Pfam Leucine rich repeat 129 188 IPR001611 GO:0005515
Mtr2g3063 776 Gene3D Transferase(Phosphotransferase) domain 1 568 776 - -
Mtr2g3063 776 SUPERFAMILY L domain-like 39 247 - -
Mtr2g3063 776 Pfam Protein tyrosine and serine/threonine kinase 494 762 IPR001245 GO:0004672|GO:0006468
Mtr2g3063 776 SUPERFAMILY Formin homology 2 domain (FH2 domain) 431 441 - -
Mtr2g3063 776 SUPERFAMILY Protein kinase-like (PK-like) 465 764 IPR011009 -
Mtr2g3063 776 PANTHER OS01G0253100 PROTEIN 27 776 IPR045271 GO:0004714|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr2g3063 Mtr-Chr2 44292602 44300470 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr2g3063 29 771 Strubbelig Receptor Gene Family AT4G03390 62.368 0.0 856
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-V Mtr2g3063 PK_Tyr_Ser-Thr 2.4e-43 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr2g3063 - - mtr:MTR_2g090120 1428.69
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr2g3063 2 44292602 44300470 Mtr2g3063 2 44292602 44300470 ECH
Mtr2g3063 2 44292602 44300470 Mtr4g1299 4 22143507 22151047 PCT