Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr2g3055 ATGGTAACGTCTCACTCAGTAGTGTTCCAATGTCTCGAAGACACAGTTCTAGTATTCGTCCAGAAGCATACTTATACCATCGCATTGGAGAAGCCAGAATGGTTACCTTATCTAATAGCATTGGATATGTCTCGTGCTGGGTATTATCTTGAACCTTTGCTTGAAACTTCGATCTTTTATATACCGACATCTGTCAACCAATTGCCAACCTGGTTCCCTTTTCTATACATCTATTTGGCTATCGAGTTAGTGGTAAAATATAGGGATTTCCCTCTTATATTGAGATTCCATGTAATGATGGGAATGCTACTGGAAACTGCTTTCCAGATAGTATCTGTTGCAAGCAATTACATGCCATTGATACACTTTAAGGGAACACTTGGGATGTATTACTGGGCTGGTTTGGCATTGGCATATATTGTCATAATCATGCATTCCATCAGGTGTGCTCTTCTTGGTACATTTTCGAACATTCCTGTTATTAGTGAATCAGCTCTCCTTCATTGCCTATTTAATATAGGAGGGTTCCAGCGGCCGTTTTAG 543 0.3996 MVTSHSVVFQCLEDTVLVFVQKHTYTIALEKPEWLPYLIALDMSRAGYYLEPLLETSIFYIPTSVNQLPTWFPFLYIYLAIELVVKYRDFPLILRFHVMMGMLLETAFQIVSVASNYMPLIHFKGTLGMYYWAGLALAYIVIIMHSIRCALLGTFSNIPVISESALLHCLFNIGGFQRPF* 181
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr2g3055 180 Pfam Chloroplast import apparatus Tic20-like 30 165 IPR005691 -
Mtr2g3055 180 PANTHER PROTEIN TIC 20-IV, CHLOROPLASTIC 23 180 - -
Mtr2g3055 180 PANTHER PROTEIN TIC 20-II, CHLOROPLASTIC 23 180 IPR005691 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr2g3055 Mtr-Chr2 44214694 44215505 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr2g3055 30 179 Chloroplast and Mitochondria Gene Families AT4G03320 48.466 1.24e-53 170
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr2g3055 - - mtr:MTR_2g090035 315.464