Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr2g3035 ATGAACAACACAAACACAAACATAACTCACGAGACCAAGTTCACCATGAAGGTGATAGAACATAGTCAAGTTGCACCACCACCAAATTCACTTACATCACCAACCATTCTACCCTTAACTTTCTTCGACATACCATGGTTTTATTGTCACCCAATTCAACGTATCTTCTTCTACCATTTTCCTCATCCAACTCATCATTTCCTTCAAACAACACTTCCCATTCTCAAACACTCACTTTCCATAACCCTCCTACACTTCTTCCCTTTTTCCTCTAACCTCATCGTCCCTCCAAATTCCCAAAACACCGATCCTTACATACGTTACCTCGATGAAGACTCTATCTCCTTCACCGTAGCTGAATCCTCAGCAGACTTCAATATCCTCGTATCTGATTCACAAGATGCTCAAAACTGGCACCATCTTGTTCCAAATTTACCTCCACCTCGTACCGAACAAGACAACACTCGCATCATCCCTATAATGGCTATTCAAGTCACCGTTCTTCCAAACTCCGGCTTGTCTATTTGCCTAAGTTACAACCATGTTGCTGCAGACGGAAAATCACTTCACCATTTCGTGAAATTTTGGGCCTCTCTTTCAAAAGCCATAGCAAAAAACAACAATAATTTGTCTCTTGAATACTCTCCGCCTCTTGATCTTCCTTCACATGAAAGAGATAGAGTTAAAGATCCAAATGGTCTTAAACTTGTATACTTGCAAGAATTAGAAGATTCTGAATCAAATGAAATGGAATTTGCGGGTTTGGTTCGAGATTCTTATGTTAACAAGATAAGAACAGCTTTAGTGTTGAGCTATGAACAAGTCCAGAAGTTAAAGAAATGGGTTACTGATAAATGTAAAGAGAGTTGTAGAATACAACACTTGTCAACTTTTGTTGTAACAAGTTCCTTGATTTGGTTTTGTATGATAAAAGCAGAGGAGGGTGATAGCAAAAGTGATGAAGGTGATTGTGTTGATCTTGATGATCACTGCTACTTTGTGTTTCTTGCAGATTGTCGTGATAGCGGTGAATTGTCATTACCAAAAACTTATTTTGGAAATTGTCTTGCATCTTATACCGTGGCTGTAAAGAGAGATGAGTTAATTGGAAAAAATGGGATTGTTTCGGCTTCAATTGGTATCGAAAAGAAGATAAGACATTTAAAGAGTCATGCTTTGTTAGGAGCTGAAACATTGATGTCTGATTATAGGGAAATGTCAAAACCTGGTAAGTCTGTAACTGTGGTTGCTGGTTCACCGAAATTGGCTGTTTATGAGACAGATTTTGGGTGGGGGAAGCCTAAGAAATCTGATGCTGTTCATCTTGATTCGTCCGGTTCGATTTCTCTTTCTGATTGTAGAGACGGCGGAGGTGGAATTGAAGTTGGTTTGGCTCTTGAGAGGTCTAGAATCACTAATTTCATCAACATCTTTCAAGAACAACTTGATAATATTTGTAGCATGTGA 1467 0.3892 MNNTNTNITHETKFTMKVIEHSQVAPPPNSLTSPTILPLTFFDIPWFYCHPIQRIFFYHFPHPTHHFLQTTLPILKHSLSITLLHFFPFSSNLIVPPNSQNTDPYIRYLDEDSISFTVAESSADFNILVSDSQDAQNWHHLVPNLPPPRTEQDNTRIIPIMAIQVTVLPNSGLSICLSYNHVAADGKSLHHFVKFWASLSKAIAKNNNNLSLEYSPPLDLPSHERDRVKDPNGLKLVYLQELEDSESNEMEFAGLVRDSYVNKIRTALVLSYEQVQKLKKWVTDKCKESCRIQHLSTFVVTSSLIWFCMIKAEEGDSKSDEGDCVDLDDHCYFVFLADCRDSGELSLPKTYFGNCLASYTVAVKRDELIGKNGIVSASIGIEKKIRHLKSHALLGAETLMSDYREMSKPGKSVTVVAGSPKLAVYETDFGWGKPKKSDAVHLDSSGSISLSDCRDGGGGIEVGLALERSRITNFINIFQEQLDNICSM* 489
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr2g3035 488 Gene3D - 15 253 IPR023213 -
Mtr2g3035 488 Pfam Transferase family 28 475 - -
Mtr2g3035 488 Gene3D - 261 485 IPR023213 -
Mtr2g3035 488 PANTHER - 16 487 - -
Mtr2g3035 488 PANTHER COUMAROYL-COA:ANTHOCYANIDIN 3-O-GLUCOSIDE-6''-O-COUMAROYLTRANSFERASE 1-RELATED 16 487 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr2g3035 Mtr-Chr2 44062935 44064596 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr2g3035 55 474 Monolignol Biosynthesis Gene Families AT5G48930 22.248 1.38e-10 61.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr2g3035 - - mtr:MTR_2g089670 686.797
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr2g3035 2 44062935 44064596 Mtr2g3035 2 44062935 44064596 ECH