Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr2g3030 ATGTCATGTTTCTTTTCGTTTGAATTTCATTTGAGCTATTCAGCAATTTCCTTTAAATTATACTTTATACATGCATTACATCTCTTGAAAATGTTGCTACTCCTAAACAGCTTGCATCACATCCTTCCATTTTCACAAATGGCATCTCCTACACAACAAGATCTTAAACTTATTGAACAAACTCTAATTATTCCATCATCTACAGCAACAATTTCTCTTCCTCTCACATTCCTTGACTTGCCTTTAGCTGGTCCAATCTATGTTAGACGCCAATTCTTCTATCACTTTCCTCATTCAACAACTCATTTTTGCAAAACAACACTTCCATCTCTCAAACACTCTCTTTCTCTTACTCTTCAACATTTCTTCCCTCTTGCTGGAAATCTAATCTCTCCACCACCACCCCACAAACCCTTTATCCTCTACACTCAAAAAGATTCTGTCACCTTTACCGTCATCGAAACCTCGGCGAATTTCAACCATCTTTCAGCCAATCACCATCCCAAAAATCTTAAAGACTATAATCATCTTGTTCCAAAGTTAACACACAAAACAACCTATGATGATAATGACATTGAAAATAACACATTCATTTTCCCTTTGTTGGCTTTGCAAGCTTCTGTTTTCCCTAACCATGGTCTTTGCATTGCAATCACATATTGTCATGTAATGGATGATAGTTGTTGTAGTCATTTCATGAAATCTTGGTCTTTTATGCATAGAAATTGTGAAGTAGTTGACTTGAAGTCAACACCTTGTTTTGATAGAAAAATTTTTAGGGACCCAAAAGGGCTTGAAAATGTTTTCTTAAGAGATTATTTTGAAGAAAGAAAAACATGGAAAGAGAAACTCATTGGTCAAACTAGTGAAGAAGAGTATGTAAAAGCAACTATTGTTTTTGCAAAAGAGGAAATTGAGAGAATGAAAATATGGGCACTTAATCAATGGAAGAAAAATGATCATGAAGTTCAAGCGCCACAATTGTTATCTAAATTTGTTGTAACTTGTGGTTTCATTTGGTCTAGTTTGGTTAAAACAAGATATAGAAATGAAAATGATAATGATGATGATGAAAAAGAAGAGTATTTTCGTTTTGCAGGTGATTGTAGAGATAGACTTGGGTACAAAATACCAGAGGGGTATTTTGGAAATTGTTTAACATTATGTCATGCAACTGTGAAGAGAAAGGTTATGAAGGGGGAAGATGGTTTTGTGAATGGTGTTAAAGAAATTGAAAGGGCAATAAGTGAAATGAAAAATGAACCTTTTAAAGATGTAGGAGAATGGAGGGATACATTTAAGAAGATGTATGAGGTGGGAAGTGTATTGTTGGTAACAGGATCACCTAAGTTTAATGTTTATGAGACTGATTTTGGATTTGGTAGACCTGTTAAAGTTGAAATGGTGCATTCGTTTAAGTGTATGTCTATTGCTGAAAGTGGAGATAGAGAAGGTGGTCTTGAGGTTGGGTTGGTGTTTAAAAGTGGAGAATTTGAATATTTTTGTGCTGTAATTGAACATGGACTTGAAGCTTTGAAATGCTAA 1545 0.3456 MSCFFSFEFHLSYSAISFKLYFIHALHLLKMLLLLNSLHHILPFSQMASPTQQDLKLIEQTLIIPSSTATISLPLTFLDLPLAGPIYVRRQFFYHFPHSTTHFCKTTLPSLKHSLSLTLQHFFPLAGNLISPPPPHKPFILYTQKDSVTFTVIETSANFNHLSANHHPKNLKDYNHLVPKLTHKTTYDDNDIENNTFIFPLLALQASVFPNHGLCIAITYCHVMDDSCCSHFMKSWSFMHRNCEVVDLKSTPCFDRKIFRDPKGLENVFLRDYFEERKTWKEKLIGQTSEEEYVKATIVFAKEEIERMKIWALNQWKKNDHEVQAPQLLSKFVVTCGFIWSSLVKTRYRNENDNDDDEKEEYFRFAGDCRDRLGYKIPEGYFGNCLTLCHATVKRKVMKGEDGFVNGVKEIERAISEMKNEPFKDVGEWRDTFKKMYEVGSVLLVTGSPKFNVYETDFGFGRPVKVEMVHSFKCMSIAESGDREGGLEVGLVFKSGEFEYFCAVIEHGLEALKC* 515
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr2g3030 514 PANTHER HXXXD-TYPE ACYL-TRANSFERASE FAMILY PROTEIN 51 514 - -
Mtr2g3030 514 PANTHER - 51 514 - -
Mtr2g3030 514 Pfam Transferase family 56 501 - -
Mtr2g3030 514 Gene3D - 290 512 IPR023213 -
Mtr2g3030 514 Gene3D - 55 285 IPR023213 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr2g3030 Mtr-Chr2 43990714 43992424 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr2g3030 55 501 Monolignol Biosynthesis Gene Families AT5G48930 21.351 2.25e-17 82.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr2g3030 - - aprc:113855905 632.098
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr2g3030 2 43990714 43992424 Mtr2g3030 2 43990714 43992424 ECH