Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr2g3029 ATGGGAAGAACACCTTGTTGTGATAAAAGTGGACTCAAAAAAGGTCCATGGACACAAGAAGAAGATCTTATGCTTATCAACTACATTAATACTCATGGACCTGGAAATTGGCGCAACCTCCCCAAAAATGCTGGTCTTCAAAGGTGTGGTAAGAGTTGTCGTCTTCGATGGACAAACTATTTGAGACCTGATATCAAGAGAGGAAGGTTCTCCTTTGAAGAAGAAGAGAGTATCATTCAGCTCCACAGTGTCTTGGGAAACAAGTGGTCTGCTATAGCTGCTAGATTACCCGGAAGAACAGACAATGAAATAAAGAACTACTGGAACACGCACATTAGGAAAAGACTACTTCGAAGTGGAATTGATCCTGTTACTCATACTCCACGTCTCGATCATCTATTTGACATGTCCTCCATTAATATTCTCAGATCAGCTTTATTAGGAGGAACCAACCCAATGAACCCATCATTTCTGAACTTATTAGGTGGTGCTCAAGCTTTCATGAACCCTGAATTGTTAAAGCTAGCTGCAACGGCCACATTATTAAACAACAACATAAATTTGGGTTCGCATAATCAACAACAAATCAATAATGCTGCTAATGGTACTCAACAACAAGTGCAAAATCAAGTTTACAATCAAGATCAATTTCAAATACCAACTCAAACACACAATGTGAATAATGGCTTATTAGGAAACATGAGTTGTTCAAGTTCAGCTGAAAATACAAATCCTTGTTATTTTGGAGAGGACTTGATTTCTAAACAATATTCAGAATTGTTTCATTGCCTAAATAATGATGGAAACAAAAACAGTATGGGATATGAATCAGTTATATCGACTACGCCTTTATCGACGACACCAACTCCATCACCAACTTATGTGAATAGCTGCACAGAGGAAGAGAGGGATACATATTGCAGTGACATATTCAAGTTCGAAATTCCGGAGAGTACTTTGGATATTAATGATTTCTTGTAA 981 0.3782 MGRTPCCDKSGLKKGPWTQEEDLMLINYINTHGPGNWRNLPKNAGLQRCGKSCRLRWTNYLRPDIKRGRFSFEEEESIIQLHSVLGNKWSAIAARLPGRTDNEIKNYWNTHIRKRLLRSGIDPVTHTPRLDHLFDMSSINILRSALLGGTNPMNPSFLNLLGGAQAFMNPELLKLAATATLLNNNINLGSHNQQQINNAANGTQQQVQNQVYNQDQFQIPTQTHNVNNGLLGNMSCSSSAENTNPCYFGEDLISKQYSELFHCLNNDGNKNSMGYESVISTTPLSTTPTPSPTYVNSCTEEERDTYCSDIFKFEIPESTLDINDFL* 327
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr2g3029 326 CDD SANT 69 112 IPR001005 -
Mtr2g3029 326 Gene3D - 13 66 - -
Mtr2g3029 326 PANTHER TRANSCRIPTION FACTOR MYB41 1 320 - -
Mtr2g3029 326 Pfam Myb-like DNA-binding domain 67 111 IPR001005 -
Mtr2g3029 326 Pfam Myb-like DNA-binding domain 14 61 IPR001005 -
Mtr2g3029 326 CDD SANT 16 61 IPR001005 -
Mtr2g3029 326 PANTHER MYB FAMILY TRANSCRIPTION FACTOR 1 320 - -
Mtr2g3029 326 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 9 61 IPR017930 -
Mtr2g3029 326 SMART sant 13 63 IPR001005 -
Mtr2g3029 326 SMART sant 66 114 IPR001005 -
Mtr2g3029 326 SUPERFAMILY Homeodomain-like 11 108 IPR009057 -
Mtr2g3029 326 ProSiteProfiles Myb-like domain profile. 9 61 IPR001005 -
Mtr2g3029 326 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 62 116 IPR017930 -
Mtr2g3029 326 Gene3D - 69 116 - -
Mtr2g3029 326 ProSiteProfiles Myb-like domain profile. 62 112 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr2g3029 Mtr-Chr2 43975270 43977165 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr2g3029 1 326 MYB Transcription Factor Family AT4G21440 45.238 1.55e-93 280
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Mtr2g3029 Myb_DNA-binding 4.9e-14 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr2g3029 K09422 - gmx:100812189 377.096
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr2g3029 2 43975270 43977165 Mtr2g3029 2 43975270 43977165 ECH