Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr2g3022 ATGGTGAGAACCCCTTATTGTGACAAAAATGGACTAAGGAAAGGCACATGGACACCCGAGGAAGACAAAAAGTTGATTGCTTATGTAACTAGGTATGGCTGTTGGAATTGGCGACAATTACCTAAATTTGCAGGTCTTGAAAGGTGTGGGAAGAGTTGTAGACTAAGGTGGTTGAACTATCTAAGGCCAGATATCAAAAGAGGGAGCTTTAGTCATGAAGAAGAAGAGACTATCATCAAACTTCATGAAAAATTGGGTAATAGATGGACCATGATTTCTGCAAATTTACCAGGGAGAACAGATAACGAGATAAAGAACTACTGGCACACCACCATAAAAAAGACTCTTGTAAAGAATAAGTCAAACACCAAACGTGGAACGAAAAAAGCCAAAGACTCAAATTCAAAAAATCACCCTACAATGGAAAAACCCAAGAAACTTGGAGAAATGTTAGAGAACAACAGTGATTTCAATATTACGAGTCCACCATCTTCACAACCATCTACAAGTGCATCCTCTTGCATATCATTAATGGACACTGCAGCTACTACTACAATATCATATGAAAATTCTTCTCTTTTTGATGACTATGACGACCTTCCTTTTATGGATGCATATGTGAGTGAAAATTTCTGGACAGAGCCATATATAATAGACAGTTTATATGTCCTTCCAAATGAAGATTCTATATTACTTGAACATGAATACTTTAGTCCTGTATACGATGCAGAACTTTGGAGCCATGGAAAATAA 753 0.3705 MVRTPYCDKNGLRKGTWTPEEDKKLIAYVTRYGCWNWRQLPKFAGLERCGKSCRLRWLNYLRPDIKRGSFSHEEEETIIKLHEKLGNRWTMISANLPGRTDNEIKNYWHTTIKKTLVKNKSNTKRGTKKAKDSNSKNHPTMEKPKKLGEMLENNSDFNITSPPSSQPSTSASSCISLMDTAATTTISYENSSLFDDYDDLPFMDAYVSENFWTEPYIIDSLYVLPNEDSILLEHEYFSPVYDAELWSHGK* 251
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr2g3022 250 Gene3D - 14 66 - -
Mtr2g3022 250 ProSiteProfiles Myb-like domain profile. 9 61 IPR001005 -
Mtr2g3022 250 MobiDBLite consensus disorder prediction 153 172 - -
Mtr2g3022 250 CDD SANT 69 112 IPR001005 -
Mtr2g3022 250 Gene3D - 69 147 - -
Mtr2g3022 250 MobiDBLite consensus disorder prediction 119 144 - -
Mtr2g3022 250 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 62 116 IPR017930 -
Mtr2g3022 250 PANTHER MYB-RELATED TRANSCRIPTION FACTOR 1 222 - -
Mtr2g3022 250 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 9 61 IPR017930 -
Mtr2g3022 250 CDD SANT 16 61 IPR001005 -
Mtr2g3022 250 PANTHER MYB FAMILY TRANSCRIPTION FACTOR 1 222 - -
Mtr2g3022 250 MobiDBLite consensus disorder prediction 126 144 - -
Mtr2g3022 250 SUPERFAMILY Homeodomain-like 11 108 IPR009057 -
Mtr2g3022 250 ProSiteProfiles Myb-like domain profile. 62 112 IPR001005 -
Mtr2g3022 250 Pfam Myb-like DNA-binding domain 14 61 IPR001005 -
Mtr2g3022 250 Pfam Myb-like DNA-binding domain 67 110 IPR001005 -
Mtr2g3022 250 SMART sant 66 114 IPR001005 -
Mtr2g3022 250 SMART sant 13 63 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr2g3022 Mtr-Chr2 43902340 43904582 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr2g3022 1 220 MYB Transcription Factor Family AT2G31180 45.455 1.41e-59 187
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Mtr2g3022 Myb_DNA-binding 1.2e-13 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr2g3022 K09422 - mtr:MTR_2g089420 311.612
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr2g3022 2 43902340 43904582 Mtr2g3022 2 43902340 43904582 ECH
Mtr2g3022 2 43902340 43904582 Mtr4g1335 4 23002301 23004726 PCT
Mtr4g1336 4 23089221 23090429 Mtr2g3022 2 43902340 43904582 PCT