Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr2g3015 ATGAAGAAAAACTGCGAACTCTGCAAGCTTCCAGCTAGAACTTTCTGTGAGTCAGACCAGGCTAGCTTATGCTGGGACTGCGATTCTAAGGTCCACGCTGCTAACTTTTTGGTTGAGAGACACATGAGAACTCTCCTCTGTCACGCTTGTCAATCTCCCACGCCGTGGAAAGCCTCCGGTGCTAGGCTCGGTAACGCGCTTTCGTTGTGTGATAGATGCGCCGGCGGAAGAAAACTCCACGCCGACGCCAACGCCAACGCCAACGCCGGTACCAGCGCTGAACAACAAGATGAAAGCGAAGGTGACAATGACAATGAAGAAGATACGGATTACGATTCCGATGAGGATGATGATGATGTTGATGGTGATGAGGACGGTGATAATCAGGTTGTACCTTGGTCGTCAACGGCGGCGCAGCCTCCACCGGCTTCGAGTTCCTCCGGTAGCGATGAGTCGGTTTCGGTTAGCAAGTGCAACGATAACCACGATGAGGTTATTTCGAAGTTAGTTACAACGATTTCTTTGAAACGACGTCGTTTGGATCATGATTTTGAGGTTTCGGATTCGAAAAATTGGAAAAATCAACGAAGAGAGGTGGATGAGGTTGATTTGATAGGGTGCGACGGGGAACCGTCGTCGAAGGCGGCGATGCGGCGGTATAGCGACTTAAATGGATCGGAGCATTCTCAGCCACACGATTGA 702 0.5043 MKKNCELCKLPARTFCESDQASLCWDCDSKVHAANFLVERHMRTLLCHACQSPTPWKASGARLGNALSLCDRCAGGRKLHADANANANAGTSAEQQDESEGDNDNEEDTDYDSDEDDDDVDGDEDGDNQVVPWSSTAAQPPPASSSSGSDESVSVSKCNDNHDEVISKLVTTISLKRRRLDHDFEVSDSKNWKNQRREVDEVDLIGCDGEPSSKAAMRRYSDLNGSEHSQPHD* 234
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr2g3015 233 PANTHER ZINC FINGER PROTEIN CONSTANS-LIKE 10 3 207 - -
Mtr2g3015 233 Pfam B-box zinc finger 3 33 IPR000315 GO:0008270
Mtr2g3015 233 SMART bboxneu5 1 46 IPR000315 GO:0008270
Mtr2g3015 233 MobiDBLite consensus disorder prediction 97 126 - -
Mtr2g3015 233 MobiDBLite consensus disorder prediction 205 233 - -
Mtr2g3015 233 MobiDBLite consensus disorder prediction 129 155 - -
Mtr2g3015 233 PANTHER - 3 207 - -
Mtr2g3015 233 MobiDBLite consensus disorder prediction 86 159 - -
Mtr2g3015 233 CDD Bbox1_BBX-like 5 46 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr2g3015 Mtr-Chr2 43828545 43829815 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr2g3015 1 141 C2C2-CO-like Transcription Factor Family AT4G27310 42.857 6.52e-35 122
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Mtr2g3015 zf-B_box 5.4e-06 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr2g3015 - - mtr:MTR_2g089310 397.512
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr2g3015 2 43828545 43829815 Mtr2g3015 2 43828545 43829815 ECH