Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Mtr2g3011 | ATGTTGGCGAAAGCTTGTGAAAAGGGGGATGGATCTAAGTCCCTGGGTAAGATACTGGCAAGATGGAGGGAATATAATGCCCAACTTGATGCCGGCAATGATGCGAATAAGCCTGTTCGCAAAGTTGCAGCCAAAGGATCGAAGAAAGGGTGTATGAAAGGTAAAGGAGGGCCGGAAAACTCCCGGTGTAATTATAGAGGTGTGAGACAAAGGACTTGGGGGAAATGGGTTTCTGAAATCCGTGAGCCGAATCGAGGGAGTAGGCTATGGCTAGGTACTTTTACCACCGCCATTGGTGCTGCTCTTGCTTATGACGAGGCAGCCAGGGCAATGTATGGTTCTCGTGCGCGTCTCAACTTTCCTAATGTTTCGGTTACTAGATTCTCTGATGAATCTCCAAACGATTCTCCAGATGCAAATCACTTGGCAGTATCAACAAATACCGAGTCCATGATAATACCAGATAACTCAGGGATAGGAGTAGAAGACAGTAATGATATGGAACCAACTTCCTTATGCTTAAGTATAAAGCAGGAGAATGAGGAAGGTGAGTCGGAGATAAATTAA | 567 | 0.455 | MLAKACEKGDGSKSLGKILARWREYNAQLDAGNDANKPVRKVAAKGSKKGCMKGKGGPENSRCNYRGVRQRTWGKWVSEIREPNRGSRLWLGTFTTAIGAALAYDEAARAMYGSRARLNFPNVSVTRFSDESPNDSPDANHLAVSTNTESMIIPDNSGIGVEDSNDMEPTSLCLSIKQENEEGESEIN* | 189 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Mtr2g3011 | 188 | PANTHER | DEHYDRATION-RESPONSIVE ELEMENT-BINDING PROTEIN 2C | 7 | 182 | - | - | |
Mtr2g3011 | 188 | SMART | rav1_2 | 64 | 127 | IPR001471 | GO:0003700|GO:0006355 | |
Mtr2g3011 | 188 | ProSiteProfiles | AP2/ERF domain profile. | 64 | 121 | IPR001471 | GO:0003700|GO:0006355 | |
Mtr2g3011 | 188 | SUPERFAMILY | DNA-binding domain | 64 | 121 | IPR016177 | GO:0003677 | |
Mtr2g3011 | 188 | MobiDBLite | consensus disorder prediction | 129 | 154 | - | - | |
Mtr2g3011 | 188 | CDD | AP2 | 63 | 123 | IPR001471 | GO:0003700|GO:0006355 | |
Mtr2g3011 | 188 | PRINTS | Ethylene responsive element binding protein signature | 65 | 76 | IPR001471 | GO:0003700|GO:0006355 | |
Mtr2g3011 | 188 | PRINTS | Ethylene responsive element binding protein signature | 87 | 103 | IPR001471 | GO:0003700|GO:0006355 | |
Mtr2g3011 | 188 | MobiDBLite | consensus disorder prediction | 129 | 188 | - | - | |
Mtr2g3011 | 188 | Gene3D | AP2/ERF domain | 64 | 123 | IPR036955 | GO:0003700|GO:0006355 | |
Mtr2g3011 | 188 | PANTHER | DEHYDRATION-RESPONSIVE ELEMENT-BINDING PROTEIN 2C | 7 | 182 | - | - | |
Mtr2g3011 | 188 | Pfam | AP2 domain | 63 | 113 | IPR001471 | GO:0003700|GO:0006355 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Mtr2g3011 | Mtr-Chr2 | 43759184 | 43761854 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Mtr2g3011 | 8 | 132 | AP2-EREBP Transcription Factor Family | AT2G40340 | 55.556 | 7.74e-49 | 160 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | AP2 or ERF-ERF | Mtr2g3011 | AP2 | 1.1e-12 | CL0081 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Mtr2g3011 | - | K09286 | cam:101488673 | 294.664 |