Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr2g2993 ATGCTACTCCTATATTTCTATACGTCAAGTATATCATTAATCATGTCACACTCAATCTACCTTGCTTGTTGCTACTATATGCAGCGTTTCTTGGGGGTAGGGGGATTCCACATTCTTGGTTTGGATAAGGAGCAAAGCAGTTCAGATTACAGAAGCTGTGTTCCGTCCAATCCGATCCATTCCGATCCAATCCATTCCATTTCATTTCGTTTCATTCCATCAGAGTTATCTAAGATTTGGCCACATTTGGTTGATGCAAATTCATCAAATGCTGCTTGGGAATCACCTAGCACTAGTTCTTTGCCTAAAACTGAAAGCAGTTCCGGCCGCGGTCAGCATTTGGAACAGCAACCTGAAAAGAATGGTTTCGTTGGTTTGGCGAATGACAAGTTGGGCGAAGGAGATACGTGTGTCAAATATGAACCTTGGATTGAAAATTCTCCTATTATTCCATCAAATTCAAACTGCACACAATACTACAAAGATCAACCATTTTTATTTAATCAAGACTCAAACCAACAGAAGCTTCAAGGATTCCATGATGTTAAGGATCTAATAATTCATGAGGGGACCAGTCTATGTGAAGGTTTCAATGTGGATGATATTCAATTAAACTTTGAAAGTGCCGACGAAATAATATTTGACTGCTCTCAAACTGCCACAAAATACAACCATGAAGATGGAGGAATAGAATGTCTATTAATGGATAAAAACATTCCAGTCACAAAATGTAGCAGTCACATTGAGACTGCGGTAGAGGCTTCTTCATCAGTTCAACAAGATTGTATGATTTTTCCATCATCAGGGGCTGGTGGATCAACAAATTTGATGCAGGGATTCAACAATAGTGCAAATTGTGCACTTATGCCTCCTAGTTGTAACAGAAGCATGCCTCTAGAATTTCCTCAGAGTCAAACTCATTCAGGCATATCAATTCAATTACCTAACATAAATGGTGAAAGCAATGTTGCTGAACTTCTAGATTGTGGGTTACCTCCAGTGTTTCATCCTGGTGAATCGCATTGGGAATCAAATTTGGAGGGTGCATGTCCTCAAGCAAGGGATAAAGCCAAAATGAGATACCAAGAGAAAAAGAAAACTCGAACGTTTGGTAAGCAAATAAGATATGCGTCTCGCAAAGCAAGGGCTGATACAAGAAAACGTGTGAAAGGTAGATTTGTTAAAGCAGGTGAAGCATATGACTATGATCCTCTTTTGAGCGACCACTAA 1230 0.3951 MLLLYFYTSSISLIMSHSIYLACCYYMQRFLGVGGFHILGLDKEQSSSDYRSCVPSNPIHSDPIHSISFRFIPSELSKIWPHLVDANSSNAAWESPSTSSLPKTESSSGRGQHLEQQPEKNGFVGLANDKLGEGDTCVKYEPWIENSPIIPSNSNCTQYYKDQPFLFNQDSNQQKLQGFHDVKDLIIHEGTSLCEGFNVDDIQLNFESADEIIFDCSQTATKYNHEDGGIECLLMDKNIPVTKCSSHIETAVEASSSVQQDCMIFPSSGAGGSTNLMQGFNNSANCALMPPSCNRSMPLEFPQSQTHSGISIQLPNINGESNVAELLDCGLPPVFHPGESHWESNLEGACPQARDKAKMRYQEKKKTRTFGKQIRYASRKARADTRKRVKGRFVKAGEAYDYDPLLSDH* 410
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr2g2993 409 Pfam CCT motif 354 396 IPR010402 GO:0005515
Mtr2g2993 409 MobiDBLite consensus disorder prediction 91 127 - -
Mtr2g2993 409 PANTHER CCT MOTIF FAMILY PROTEIN-RELATED 60 408 - -
Mtr2g2993 409 ProSiteProfiles CCT domain profile. 354 396 IPR010402 GO:0005515
Mtr2g2993 409 PANTHER ZINC FINGER PROTEIN CONSTANS-LIKE 10 60 408 - -
Mtr2g2993 409 MobiDBLite consensus disorder prediction 91 115 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr2g2993 Mtr-Chr2 43601486 43607580 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr2g2993 149 404 C2C2-CO-like Transcription Factor Family AT3G21880 42.085 1.42e-47 164
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Mtr2g2993 CCT 1.7e-16 CL0281
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr2g2993 - - mtr:MTR_2g088900 667.151
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr2g2993 2 43601486 43607580 Mtr2g2993 2 43601486 43607580 ECH