Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr2g2987 ATGGAACCACCAATTTGTTGTATTACCTCGCGTTGTGCCAATGAAATTACCACACTTCTCTCTCCTCCCTCACCTCACCAACTTCAGGAATATTATCAAAAGATTTTCTCTTCAAGGCACTGCAATGACATCACTGTCAAACATGATGACCAACTTGGAAAAGGTGTGTATGCTGTAAAGGACTTCAAAGAGGATCAACTTGTTCTCAAGGACCAAATGCTTGTTGGGAATCAACACTCTTTCAACAAGATTGATTGTTTTGTCTGTAGCTTCTGCTTTCGTTTTATTGGTTCCATAGAAATTCAAATTGGTAGGAGGCTTTACTTGGAAGAATTAAGGGCCAACAAGAGTCATGATTGTGATGTAGGAAGCTCTTCAAAGTCTTCAAAAAACTGTCATGAAATGGATTCATCTGATGAAGAGGAGAGTACTTGGAAATGTAGTTCTGGAAGTTCCAAAACTAAAGTTCCTTTACCCGAAGGTGTTGTGGAATTGTTGATGAATGGCCAATTCAGATTGCCTTACTCTGAGAAGTTCTCTTTGCCTCAAGCTGTTCCATGCCATGGTGGATGTGGAGAAGCTTACTACTGCAGCATGTCATGTGCAGAGGCTGATTGGGAGTCCTCCCATTCTTTACTCTGTACTGGTGAGAGTTCTGATCCAAGACGTAAGGAGGCACTCCTTAAATTCGTGAAACATGCTAATGAAACAAATGATATATTCCTCCTTGCTGCAAAGGTCATTTCTTCTACCATATTAAGGTACCGCAAGTTAAAAGCAAATTATCCTGCAGAGAAAGAGAAATATGATGCATCCTGTGTTTCAGACCACTATAATATATCTCTTCTTATGGAAGCTTGGAGACCTATATCAATGGGATACAAAAAAAGGTGGTGGGACTGCATTGCACTACCAGATGATATTGATTCTTCCGATGAAGCATCATTCAGGATGCAAATTAAAGAGTTGGCATTTGAGTCTCTCCAACTTCTTAAGGAAGGAATATTTGTCCAGGAATGTGAGCCATTATTCTCTCTTGAAATCTATGGACATATCATTGGCATGTTTGAGCTGAATAATCTTGATTTGGTTGTTGCTTCTCCTGTGGAGGATTACTTTTTATACATCAATGATATGTCGGATCCTGATAAGGAAGAAGCTGAGAAAATTACACAACCAATTCTAGATGCTCTAGGCGAAGACTACTCTACTTGTTGCGAAGGAACTGCATTTTTTCCTTTGCAAAGCTGTTTGAACCATTCATGTTGTCCTAATGCTAAAGCTTTCAAAAGAGACGAGGATAGAGATGGCCAAGCAATAATAATTGCACTGAGGTCCATCAGTAAAGGAGAAGAGATAACCATTTCATATGTTGATGAGGACCTTCCATTTGAAGAGAGACAAGCATCCCTTGCAGACTATGGTTTCAGATGTAGATGTCCAAAGTGCATTGAAGAAGAGCCATAA 1467 0.3967 MEPPICCITSRCANEITTLLSPPSPHQLQEYYQKIFSSRHCNDITVKHDDQLGKGVYAVKDFKEDQLVLKDQMLVGNQHSFNKIDCFVCSFCFRFIGSIEIQIGRRLYLEELRANKSHDCDVGSSSKSSKNCHEMDSSDEEESTWKCSSGSSKTKVPLPEGVVELLMNGQFRLPYSEKFSLPQAVPCHGGCGEAYYCSMSCAEADWESSHSLLCTGESSDPRRKEALLKFVKHANETNDIFLLAAKVISSTILRYRKLKANYPAEKEKYDASCVSDHYNISLLMEAWRPISMGYKKRWWDCIALPDDIDSSDEASFRMQIKELAFESLQLLKEGIFVQECEPLFSLEIYGHIIGMFELNNLDLVVASPVEDYFLYINDMSDPDKEEAEKITQPILDALGEDYSTCCEGTAFFPLQSCLNHSCCPNAKAFKRDEDRDGQAIIIALRSISKGEEITISYVDEDLPFEERQASLADYGFRCRCPKCIEEEP* 489
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr2g2987 488 SUPERFAMILY SET domain 42 481 IPR046341 -
Mtr2g2987 488 Pfam SET domain 53 457 IPR001214 GO:0005515
Mtr2g2987 488 ProSiteProfiles SET domain profile. 33 458 IPR001214 GO:0005515
Mtr2g2987 488 MobiDBLite consensus disorder prediction 118 137 - -
Mtr2g2987 488 Gene3D SET domain 379 487 IPR046341 -
Mtr2g2987 488 CDD SET_SMYD 397 483 - -
Mtr2g2987 488 SMART set_7 42 464 IPR001214 GO:0005515
Mtr2g2987 488 Pfam MYND finger 185 214 IPR002893 -
Mtr2g2987 488 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE ATXR2 15 487 IPR044237 GO:0008168
Mtr2g2987 488 SUPERFAMILY HIT/MYND zinc finger-like 186 215 - -
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Mtr2g2987 SET 1.9e-11 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr2g2987 - - aip:107613919 788.875
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr2g2987 2 43551837 43558376 Mtr2g2987 2 43551837 43558376 ECH