Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr2g2983 ATGGACAACGTGGAATGCTCCTCTGAGGAAGTTTCTTCTGATTCTTCTATAGCACTGCAATCCAATTCCAGTGGTACTCAAGTAAATTCCAAGGTTGAATTTTCTAAAGATGAGGAAGATCTTATCATCAGAATGCATAAACTAGTGGGGGATAGGTGGCCTTTAATTGCGGGAAGAATACCTGGAAGAACAGCTGAAGAAATAAAGAATTACTGGATTTCAAGACACTCTTCCACTAGCCAATGA 246 0.3984 MDNVECSSEEVSSDSSIALQSNSSGTQVNSKVEFSKDEEDLIIRMHKLVGDRWPLIAGRIPGRTAEEIKNYWISRHSSTSQ* 82
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr2g2983 81 ProSiteProfiles Myb-like domain profile. 26 76 IPR001005 -
Mtr2g2983 81 PANTHER TRANSCRIPTION FACTOR TRY-LIKE 9 79 - -
Mtr2g2983 81 Gene3D - 33 75 - -
Mtr2g2983 81 SUPERFAMILY Homeodomain-like 33 75 IPR009057 -
Mtr2g2983 81 MobiDBLite consensus disorder prediction 1 31 - -
Mtr2g2983 81 Pfam Myb-like DNA-binding domain 31 73 IPR001005 -
Mtr2g2983 81 SMART sant 30 78 IPR001005 -
Mtr2g2983 81 MobiDBLite consensus disorder prediction 1 32 - -
Mtr2g2983 81 CDD SANT 33 72 IPR001005 -
Mtr2g2983 81 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 31 80 IPR017930 -
Mtr2g2983 81 PANTHER TRANSCRIPTION FACTOR MYB51-LIKE ISOFORM X1 9 79 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr2g2983 Mtr-Chr2 43517846 43519081 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr2g2983 34 72 MYB Transcription Factor Family AT5G14750 66.667 1.02e-16 67.8
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Mtr2g2983 Myb_DNA-binding 1.1e-10 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr2g2983 - - mtr:MTR_2g088730 160.614