Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr2g2981 ATGAACGACCTTCTCACTGATTCATTTGTTAGTGAGGCTAATCATGGACAACCTTCTAGACAAGGTGATATTGAAATGGGATTGCAGGATCAAAGAAGCAGTTCTGATATGGGAATGGAAGCTTTTAATAAACAGATCCAAGATGCTGATAAACAAATTGAGAAGGTGTCTGCGCTACTTCAAAAGCTAAAGGAAGCTAATGAGGAATCAAAAGCTGTTACAAAAGCATCTGCCATGAAAGCTATCAAAAAGAGGATGGAAAAGGATATTGATGAAGTTGGGAAGATTGCACATGGGGTCAAAGCAAAAATAGAAGCTATCAATAGAGAAAATCTGAACAATAGACAAAAGCCTGGCTGTGAGAAGGGAACTGGTATTGACAGAGCAAGAATGAATATGACAAATTCATTGACTAAAAAGTTCAGGGATCTCATGACAGAATTCCAGACTCTCAGACAAAGAATACAAGATGAATATCGTGAGGTTGTGGAGAGAAGAGTTATTACAGTTACGGGAACTAGACCAGATGATGAGACGATTGACCACCTGATAGAAACTGGAAACAGTGAGCAAATCTTCCAGCAGGCAATTCTTGAAGCAGGCCGAGGACAGGTCGTGAGCACTGTAGAAGAAATTCAGGAGAGACATGATGCTGTGAAAGAAATTGAGAAAAAACTTCTTGATTTACATCAGATTTACCTTGACATGGCAGTGTTAGTTGAAGCTCAAGGAGAAATTTTAGACAACATCGAAAGCCAGGTGGCAAACGCAACTGATCATGTGAAGTCGGGTAACGATGCTCTACATACTGCAAAGAGTTTGCAAAAGAAGTCAAGGAAGTGCATGATGATTGCCATTATATTGGTCCTGCTCATCGCCATCTTTATAGTACTCGGTGTTGTGAAACCATGGAAGAAGTAA 921 0.3996 MNDLLTDSFVSEANHGQPSRQGDIEMGLQDQRSSSDMGMEAFNKQIQDADKQIEKVSALLQKLKEANEESKAVTKASAMKAIKKRMEKDIDEVGKIAHGVKAKIEAINRENLNNRQKPGCEKGTGIDRARMNMTNSLTKKFRDLMTEFQTLRQRIQDEYREVVERRVITVTGTRPDDETIDHLIETGNSEQIFQQAILEAGRGQVVSTVEEIQERHDAVKEIEKKLLDLHQIYLDMAVLVEAQGEILDNIESQVANATDHVKSGNDALHTAKSLQKKSRKCMMIAIILVLLIAIFIVLGVVKPWKK* 307
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr2g2981 306 ProSiteProfiles t-SNARE coiled-coil homology domain profile. 209 271 IPR000727 -
Mtr2g2981 306 PANTHER SYNTAXIN OF PLANTS 122 PROTEIN 10 300 - -
Mtr2g2981 306 SMART tSNARE_6 204 271 IPR000727 -
Mtr2g2981 306 Gene3D - 34 163 - -
Mtr2g2981 306 SUPERFAMILY t-snare proteins 36 264 IPR010989 GO:0016020|GO:0016192
Mtr2g2981 306 CDD SNARE_syntaxin1-like 208 268 - -
Mtr2g2981 306 Coils Coil 39 76 - -
Mtr2g2981 306 SMART SynN_4 34 160 IPR006011 GO:0016020
Mtr2g2981 306 Gene3D - 203 302 - -
Mtr2g2981 306 Pfam SNARE domain 245 297 IPR000727 -
Mtr2g2981 306 Pfam Syntaxin 42 244 IPR006011 GO:0016020
Mtr2g2981 306 CDD SynN 39 196 IPR006011 GO:0016020
Mtr2g2981 306 PANTHER SYNTAXIN 10 300 IPR045242 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr2g2981 Mtr-Chr2 43505436 43511584 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr2g2981 1 304 SNARE and Associated Proteins AT3G03800 59.211 6.67e-118 340
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr2g2981 K08486 - gmx:100800991 491.115
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr2g2981 2 43505436 43511584 Mtr2g2981 2 43505436 43511584 ECH